RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CHCHD6Q9BRQ6 235 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 TTTY10Q9BZA0 68 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 ALX4Q9H161 411 aaPredicted RBP5.91□□□□□ -1.46
SMC3-202ENST00000462899 OR51J1Q9H342 316 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 NCOR1P1Q9H4R4 102 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 ERVK13-1Q9NX77 482 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 OR52A1Q9UKL2 312 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 IGHV3-72A0A0B4J1Y9 119 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 HMGB1P1B2RPK0 211 aaPredicted RBP5.9□□□□□ -1.46
SMC3-202ENST00000462899 LOC110117498-PIK3R3F6TDL0 507 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 KDM4BO94953 1096 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 IGHV3-7P01780 117 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 OR8U9P0C7N5 309 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 OR5H8P0DN80 308 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 CALCBP10092 127 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 PRKACAP17612 351 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 NFYBP25208 207 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 F2RL1P55085 397 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 ZP1P60852 638 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 CDK5Q00535 292 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 GABPB1Q06547 395 aaPredicted RBP5.9□□□□□ -1.46
SMC3-202ENST00000462899 ATXN7L3Q14CW9 347 aaPredicted RBP5.9□□□□□ -1.46
SMC3-202ENST00000462899 CDK5R1Q15078 307 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 ANKRD39Q53RE8 183 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 KRBOX4Q5JUW0 171 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 BCL2L15Q5TBC7 163 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 PLEKHG7Q6ZR37 379 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 SLC16A12Q6ZSM3 486 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 HAPLN4Q86UW8 402 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 DNAAF1Q8NEP3 725 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 OR2T10Q8NGZ9 312 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 HAVCR2Q8TDQ0 301 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 ASB17Q8WXJ9 295 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 DDB2Q92466 427 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 OTULINQ96BN8 352 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 BORCS8Q96FH0 119 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 NSMCE2Q96MF7 247 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 TOLLIPQ9H0E2 274 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 HIPK2Q9H2X6 1198 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 RETNQ9HD89 108 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 EXOSC4Q9NPD3 245 aaKnown RBP5.9□□□□□ -1.46
SMC3-202ENST00000462899 CALYQ9NYX4 217 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 IDI2-AS1Q9NZ38 188 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 OR6C3Q9NZP0 311 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 GLS2Q9UI32 602 aa5.9□□□□□ -1.46
SMC3-202ENST00000462899 MRM2Q9UI43 246 aaKnown RBP5.9□□□□□ -1.46
SMC3-202ENST00000462899 IGHV4OR15-8A0A075B7B6 117 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 A0A087WW49 117 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 TCRBV5S2A0A599 114 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 NCBP2LA6PVI3 153 aaKnown RBP5.89□□□□□ -1.47
SMC3-202ENST00000462899 NOTOA8MTQ0 251 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 ZNF736B4DX44 427 aaPredicted RBP5.89□□□□□ -1.47
SMC3-202ENST00000462899 LINC01619G3V211 115 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 G3V318 75 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 H3BSH0 61 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 SH2D1BO14796 132 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 MAGEB4O15481 346 aaPredicted RBP5.89□□□□□ -1.47
SMC3-202ENST00000462899 SOX15O60248 233 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 GATBO75879 557 aaKnown RBP5.89□□□□□ -1.47
SMC3-202ENST00000462899 IFNA6P05013 189 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 MRPL3P09001 348 aaKnown RBP5.89□□□□□ -1.47
SMC3-202ENST00000462899 CD1BP29016 333 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 HTR1FP30939 366 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 SOX6P35712 828 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 VHLP40337 213 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 RBP2P50120 134 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 GNG10P50151 68 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 RAB9AP51151 201 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 SNU13P55769 128 aaKnown RBP5.89□□□□□ -1.47
SMC3-202ENST00000462899 PDZK1IP1Q13113 114 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 APOFQ13790 326 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 GALEQ14376 348 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 GINS1Q14691 196 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 SATL1Q86VE3 508 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 SGPP2Q8IWX5 399 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 PGAM4Q8N0Y7 254 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 LINC00311Q8N616 119 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 MINDY2Q8NBR6 621 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 CHST4Q8NCG5 386 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 OR10G2Q8NGC3 310 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 OR10A7Q8NGE5 316 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 OR8H1Q8NGG4 311 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 RTN4IP1Q8WWV3 396 aaPredicted RBP5.89□□□□□ -1.47
SMC3-202ENST00000462899 OR5B12Q96R08 314 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 APOL4Q9BPW4 351 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 PRR13Q9NZ81 148 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 GSTK1Q9Y2Q3 226 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 SNX5Q9Y5X3 404 aa5.89□□□□□ -1.47
SMC3-202ENST00000462899 A0A1W2PPE3 182 aa5.88□□□□□ -1.47
SMC3-202ENST00000462899 H3BN98 237 aa5.88□□□□□ -1.47
SMC3-202ENST00000462899 ATP6V0E1O15342 81 aa5.88□□□□□ -1.47
SMC3-202ENST00000462899 GMNNO75496 209 aa5.88□□□□□ -1.47
SMC3-202ENST00000462899 MOSP00540 346 aa5.88□□□□□ -1.47
SMC3-202ENST00000462899 GAPDHP04406 335 aaKnown RBP5.88□□□□□ -1.47
SMC3-202ENST00000462899 LGALS1P09382 135 aaKnown RBP5.88□□□□□ -1.47
SMC3-202ENST00000462899 ATP6V1B2P21281 511 aa5.88□□□□□ -1.47
SMC3-202ENST00000462899 SSTR5P35346 364 aa5.88□□□□□ -1.47
SMC3-202ENST00000462899 GLP1RP43220 463 aa5.88□□□□□ -1.47
SMC3-202ENST00000462899 REG1BP48304 166 aa5.88□□□□□ -1.47
SMC3-202ENST00000462899 ZNF137PP52743 207 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms