RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 TNFSF18Q9UNG2 199 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 POLDIP2Q9Y2S7 368 aa12.3□□□□□ -0.44
HDAC6-213ENST00000462730 ITPR1Q14643 2758 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 TMEM210A6NLX4 147 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 CCSO14618 274 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 MLNRO43193 412 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 BCL2L11O43521 198 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 OR2F2O95006 317 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 GRPP07492 148 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 H2AFB1P0C5Y9 115 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 SLC25A4P12235 298 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 GLRA1P23415 457 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 ZNF154Q13106 437 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 OR2F1Q13607 317 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 SURF2Q15527 256 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-213ENST00000462730 MBNL2Q5VZF2 373 aaKnown RBP12.29□□□□□ -0.44
HDAC6-213ENST00000462730 C11orf87Q6NUJ2 197 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 LILRB2Q8N423 598 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 KDF1Q8NAX2 398 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-213ENST00000462730 SUMF2Q8NBJ7 301 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 RND1Q92730 232 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 SPACA1Q9HBV2 294 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 C14orf166Q9Y224 244 aaKnown RBP12.29□□□□□ -0.44
HDAC6-213ENST00000462730 SHANK1Q9Y566 2161 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 NUDT19A8MXV4 375 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 CDIPTO14735 213 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 DUS4LO95620 317 aaKnown RBP12.29□□□□□ -0.44
HDAC6-213ENST00000462730 SFTPCP11686 197 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 ECI1P42126 302 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 LUMP51884 338 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-213ENST00000462730 CASP6P55212 293 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 KCTD9Q7L273 389 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 PDCD10Q9BUL8 212 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 CXXC4Q9H2H0 198 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 LIME1Q9H400 295 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 RHOFQ9HBH0 211 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 COMMD9Q9P000 198 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 JKAMPQ9P055 326 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 MEMO1Q9Y316 297 aa12.29□□□□□ -0.44
HDAC6-213ENST00000462730 ZNF205O95201 554 aa12.28□□□□□ -0.44
HDAC6-213ENST00000462730 SFT2D2O95562 160 aa12.28□□□□□ -0.44
HDAC6-213ENST00000462730 PGA5P0DJD9 388 aa12.28□□□□□ -0.44
HDAC6-213ENST00000462730 CA7P43166 264 aa12.28□□□□□ -0.44
HDAC6-213ENST00000462730 SLC9A3R2Q15599 337 aa12.28□□□□□ -0.44
HDAC6-213ENST00000462730 LRRC37A5PQ49AS3 106 aa12.28□□□□□ -0.44
HDAC6-213ENST00000462730 ZNF600Q6ZNG1 722 aa12.28□□□□□ -0.44
HDAC6-213ENST00000462730 Q8IYB0 196 aa12.28□□□□□ -0.44
HDAC6-213ENST00000462730 C1orf174Q8IYL3 243 aa12.28□□□□□ -0.44
HDAC6-213ENST00000462730 VRK1Q99986 396 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-213ENST00000462730 ELOVL5Q9NYP7 299 aa12.28□□□□□ -0.44
HDAC6-213ENST00000462730 TAS2R3Q9NYW6 316 aa12.28□□□□□ -0.44
HDAC6-213ENST00000462730 RELNP78509 3460 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 TRAV24A0A0B4J272 114 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 RNF222A6NCQ9 220 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 DNASE2O00115 360 aaPredicted RBP12.27□□□□□ -0.44
HDAC6-213ENST00000462730 HS3ST1O14792 307 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 NAPSAO96009 420 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 ERVK11-1P61568 191 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 POLR2GP62487 172 aaKnown RBP eCLIP12.27□□□□□ -0.44
HDAC6-213ENST00000462730 C3orf36Q3SXR2 165 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 DHRS11Q6UWP2 260 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 CLEC18BQ6UXF7 455 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 Q6ZR03 302 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 C22orf34Q6ZV56 151 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 PPP1R1CQ8WVI7 109 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 RDH5Q92781 318 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 LRRC46Q96FV0 321 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 NRIP2Q9BQI9 281 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 MSL2Q9HCI7 577 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 Q9N2K0 584 aa12.27□□□□□ -0.44
HDAC6-213ENST00000462730 DEGS1O15121 323 aa12.27□□□□□ -0.45
HDAC6-213ENST00000462730 SIGLEC5O15389 551 aa12.27□□□□□ -0.45
HDAC6-213ENST00000462730 NXPH2O95156 264 aa12.27□□□□□ -0.45
HDAC6-213ENST00000462730 KNG1P01042 644 aa12.27□□□□□ -0.45
HDAC6-213ENST00000462730 CTSDP07339 412 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-213ENST00000462730 ZNF44P15621 663 aa12.27□□□□□ -0.45
HDAC6-213ENST00000462730 FCGR2CP31995 323 aa12.27□□□□□ -0.45
HDAC6-213ENST00000462730 GLP1RP43220 463 aa12.27□□□□□ -0.45
HDAC6-213ENST00000462730 SUPT4H1P63272 117 aaKnown RBP12.27□□□□□ -0.45
HDAC6-213ENST00000462730 Q6P435 159 aa12.27□□□□□ -0.45
HDAC6-213ENST00000462730 TOMM40LQ969M1 308 aa12.27□□□□□ -0.45
HDAC6-213ENST00000462730 SEC22AQ96IW7 307 aa12.27□□□□□ -0.45
HDAC6-213ENST00000462730 DCAF16Q9NXF7 216 aa12.27□□□□□ -0.45
HDAC6-213ENST00000462730 NBEAQ8NFP9 2946 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 RAB19A4D1S5 217 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 C16orf97H3BN30 126 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 CRYAAP02489 173 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 ZNF728P0DKX0 622 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 HLA-GP17693 338 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 FXYD4P59646 89 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 DEFA5Q01523 94 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 MSMPQ1L6U9 139 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 PCSK4Q6UW60 755 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 Q6ZS49 121 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 ACOT7LQ6ZUV0 252 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 BPIFCQ8NFQ6 507 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 ZNF471Q9BX82 626 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-213ENST00000462730 PRR13Q9NZ81 148 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 PKD1L2Q7Z442 2459 aa12.26□□□□□ -0.45
HDAC6-213ENST00000462730 SMG1Q96Q15 3661 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms