RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 OR10S1Q8NGN2 331 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 C2CD4CQ8TF44 421 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 IGFBPL1Q8WX77 278 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 FAM168AQ92567 244 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 DVL3Q92997 716 aaPredicted RBP6.61□□□□□ -1.35
USP4-207ENST00000462673 SPSB4Q96A44 273 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 SGK3Q96BR1 496 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 C10orf35Q96D05 121 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 SEH1LQ96EE3 360 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 TINAGL1Q9GZM7 467 aaPredicted RBP6.61□□□□□ -1.35
USP4-207ENST00000462673 CHST6Q9GZX3 395 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 PBOV1Q9GZY1 135 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 SAP30LQ9HAJ7 183 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 LPAR3Q9UBY5 353 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 ZNF230Q9UIE0 474 aaPredicted RBP6.61□□□□□ -1.35
USP4-207ENST00000462673 FZR1Q9UM11 496 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 VSIG4Q9Y279 399 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 MPC1Q9Y5U8 109 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 CELSR2Q9HCU4 2923 aa6.61□□□□□ -1.35
USP4-207ENST00000462673 CACNA1DQ01668 2161 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 A0A0B4J2A0 478 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 C9orf170A2RU37 121 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 DHRS7CA6NNS2 312 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 ZNF705EA8MWA4 302 aaPredicted RBP6.6□□□□□ -1.35
USP4-207ENST00000462673 MFNGO00587 321 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 TAAR5O14804 337 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 SYT7O43581 403 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 SSX5O60225 188 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 DUS4LO95620 317 aaKnown RBP6.6□□□□□ -1.35
USP4-207ENST00000462673 CRYBA1P05813 215 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 CD55P08174 381 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 FOSL1P15407 271 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 SLC25A16P16260 332 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 CPT2P23786 658 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 PSMB6P28072 239 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 PTGFRP43088 359 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 ALDH3B1P43353 468 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 MAGEB1P43366 347 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 KCNJ3P48549 501 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 GSK3AP49840 483 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 CAV2P51636 162 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 ERVS71-1P61550 626 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 POLR2GP62487 172 aaKnown RBP eCLIP6.6□□□□□ -1.35
USP4-207ENST00000462673 ZNF92Q03936 586 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 PPP1R1AQ13522 171 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 HABP2Q14520 560 aaPredicted RBP6.6□□□□□ -1.35
USP4-207ENST00000462673 OR8G1Q15617 311 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 C2orf76Q3KRA6 126 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 RNF212Q495C1 297 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 GLYATL3Q5SZD4 288 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 OR2T2Q6IF00 324 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 SPNS3Q6ZMD2 512 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 DOK3Q7L591 496 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 TRAPPC6BQ86SZ2 158 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 LRP11Q86VZ4 500 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 COMMD1Q8N668 190 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 OR5AP2Q8NGF4 316 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 OR4A4PQ8NGN8 299 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 OR13C8Q8NGS7 320 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 OR11L1Q8NGX0 322 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 NANPQ8TBE9 248 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 TMED6Q8WW62 240 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 RAB1CQ92928 201 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 FAM46BQ96A09 425 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 TECTBQ96PL2 329 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 MICU1Q9BPX6 476 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 CMSS1Q9BQ75 279 aaKnown RBP6.6□□□□□ -1.35
USP4-207ENST00000462673 NUDT16L1Q9BRJ7 211 aaKnown RBP6.6□□□□□ -1.35
USP4-207ENST00000462673 PIMREGQ9BSJ6 248 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 ADAT1Q9BUB4 502 aaKnown RBP6.6□□□□□ -1.35
USP4-207ENST00000462673 OR51M1Q9H341 326 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 KCNK15Q9H427 330 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 CHODLQ9H9P2 273 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 ASH1LQ9NR48 2969 aaKnown RBP6.6□□□□□ -1.35
USP4-207ENST00000462673 FAM206AQ9NX38 181 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 RCC2Q9P258 522 aaKnown RBP6.6□□□□□ -1.35
USP4-207ENST00000462673 METTL1Q9UBP6 276 aaKnown RBP6.6□□□□□ -1.35
USP4-207ENST00000462673 DNAJB11Q9UBS4 358 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 SHPKQ9UHJ6 478 aa6.6□□□□□ -1.35
USP4-207ENST00000462673 DSCAMO60469 2012 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 IGHV1-69-2A0A0G2JMI3 117 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 ZNF816-ZNF321PA0A0X1KG74 233 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 C5orf51A6NDU8 294 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 FBXO24O75426 580 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 DHRS3O75911 302 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 CST4P01036 141 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 IGHV1-46P01743 117 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 ISG15P05161 165 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 GLAP06280 429 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 SFTA3P0C7M3 94 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 SLC2A1P11166 492 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 LYL1P12980 280 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 PGAM2P15259 253 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 VAMP1P23763 118 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 MPV17P39210 176 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 ARHGDIBP52566 201 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 AKR1C2P52895 323 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 F2RL1P55085 397 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 IL13RA1P78552 427 aa6.59□□□□□ -1.35
USP4-207ENST00000462673 CCL8P80075 99 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms