RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 LINC00312Q9Y6C7 94 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 VGLL3A8MV65 326 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 SH2D1BO14796 132 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 MAGEB3O15480 346 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 FBXO24O75426 580 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 MMP23AO75900 390 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 IGHV1-8P0DP01 117 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 ZNF44P15621 663 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 GDNFP39905 211 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 GLIPR1P48060 266 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 RBM11P57052 281 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 LOXL3P58215 753 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 RPS25P62851 125 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 PAX5Q02548 391 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 AESQ08117 197 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 GPR50Q13585 617 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 TPBGQ13641 420 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 ATXN7L3Q14CW9 347 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 RSU1Q15404 277 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 MED22Q15528 200 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 ACSM3Q53FZ2 586 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 LIPKQ5VXJ0 399 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 CCBE1Q6UXH8 406 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 BAIAP2L2Q6UXY1 529 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 TMEM91Q6ZNR0 172 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 LHFPL4Q7Z7J7 247 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 LRRTM1Q86UE6 522 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 CHST4Q8NCG5 386 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR4D6Q8NGJ1 314 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 PLPPR1Q8TBJ4 325 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 UFD1Q92890 307 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 MUL1Q969V5 352 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 CPNE2Q96FN4 548 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 ZNF714Q96N38 554 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 NR1H4Q96RI1 486 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 GFI1Q99684 422 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 TMED9Q9BVK6 235 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 NPFFR1Q9GZQ6 430 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 WNT10AQ9GZT5 417 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 RAB18Q9NP72 206 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 ISYNA1Q9NPH2 558 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 TCF19Q9Y242 345 aa6.37□□□□□ -1.39
CDC42BPA-210ENST00000462553 A0A1W2PPH5 198 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 hADV38S2A0JD32 116 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 ODAMA1E959 279 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 A6NDX4 124 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 FAM90A8PA6NJQ4 464 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 HSPB6O14558 160 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 GEMIN2O14893 280 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 DEGS1O15121 323 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 DENRO43583 198 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 HTR3BO95264 441 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 MAS1P04201 325 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 UCHL1P09936 223 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 CGB3P0DN86 165 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 CGB7P0DN87 165 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 CD37P11049 281 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 CPEP16870 476 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 SERPINA2P20848 420 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 COX7A1P24310 79 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 MAPK3P27361 379 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 GABARAPL2P60520 117 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 SCN1BQ07699 218 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 MLLT11Q13015 90 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 BLMHQ13867 455 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 SSX1Q16384 188 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 TMEM95Q3KNT9 176 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 UTF1Q5T230 341 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 RSBN1Q5VWQ0 802 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 FOXB2Q5VYV0 432 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 ZNF626Q68DY1 528 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 Q6ZS46 218 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 NDUFA11Q86Y39 141 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 CDH26Q8IXH8 852 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 OSR2Q8N2R0 312 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 JAGN1Q8N5M9 183 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 MS4A15Q8N5U1 240 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 THRSPQ92748 146 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 CORO2AQ92828 525 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 CITED2Q99967 270 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 METTL9Q9H1A3 318 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 IFT22Q9H7X7 185 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 ACOT13Q9NPJ3 140 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 RCC2Q9P258 522 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 CKLFQ9UBR5 152 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 GLS2Q9UI32 602 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 ING4Q9UNL4 249 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 ST3GAL6Q9Y274 331 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 MRPS28Q9Y2Q9 187 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 UBE2J1Q9Y385 318 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 SESN1Q9Y6P5 492 aa6.36□□□□□ -1.39
CDC42BPA-210ENST00000462553 K7EIL1 84 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 HSMCR30P0CW71 290 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 JUNBP17275 347 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 CD34P28906 385 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 RAB13P51153 203 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 FABP5Q01469 135 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 C17orf58Q2M2W7 97 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 MPV17LQ2QL34 196 aa6.35□□□□□ -1.39
CDC42BPA-210ENST00000462553 SLC22A6Q4U2R8 563 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms