RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ADARB2-AS1A8MUL3 147 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 NPIPB11E5RHQ5 1161 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 GPX5O75715 221 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 OR2F2O95006 317 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 IGFBP3P17936 291 aaPredicted RBP15.14■□□□□ 0.01
VARS-220ENST00000461874 RBM11P57052 281 aaKnown RBP15.14■□□□□ 0.01
VARS-220ENST00000461874 RPS11P62280 158 aaKnown RBP eCLIP15.14■□□□□ 0.01
VARS-220ENST00000461874 RIPK1Q13546 671 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 RBM39Q14498 530 aaKnown RBP15.14■□□□□ 0.01
VARS-220ENST00000461874 CCDC144NLQ6NUI1 221 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 OSR2Q8N2R0 312 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 SUMF2Q8NBJ7 301 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 MRGPRDQ8TDS7 321 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 CAPSLQ8WWF8 208 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 RBM14Q96PK6 669 aaKnown RBP15.14■□□□□ 0.01
VARS-220ENST00000461874 SLC25A33Q9BSK2 321 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 IDI2-AS1Q9NZ38 188 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 HSPE1-MOB4S4R3N1 261 aa15.14■□□□□ 0.01
VARS-220ENST00000461874 G3V4G9 280 aa15.13■□□□□ 0.01
VARS-220ENST00000461874 J3QR06 171 aa15.13■□□□□ 0.01
VARS-220ENST00000461874 OR7C1O76099 320 aaPredicted RBP15.13■□□□□ 0.01
VARS-220ENST00000461874 CSTBP04080 98 aaKnown RBP15.13■□□□□ 0.01
VARS-220ENST00000461874 MNDAP41218 407 aa15.13■□□□□ 0.01
VARS-220ENST00000461874 ST3GAL4Q11206 333 aa15.13■□□□□ 0.01
VARS-220ENST00000461874 RCN1Q15293 331 aa15.13■□□□□ 0.01
VARS-220ENST00000461874 Q499Y3 187 aa15.13■□□□□ 0.01
VARS-220ENST00000461874 YIF1BQ5BJH7 314 aa15.13■□□□□ 0.01
VARS-220ENST00000461874 ZFP41Q8N8Y5 198 aa15.13■□□□□ 0.01
VARS-220ENST00000461874 RFESDQ8TAC1 157 aa15.13■□□□□ 0.01
VARS-220ENST00000461874 PGLYRP3Q96LB9 341 aa15.13■□□□□ 0.01
VARS-220ENST00000461874 S100A13Q99584 98 aa15.13■□□□□ 0.01
VARS-220ENST00000461874 ZNF184Q99676 751 aaPredicted RBP15.13■□□□□ 0.01
VARS-220ENST00000461874 PAK1IP1Q9NWT1 392 aaPredicted RBP15.13■□□□□ 0.01
VARS-220ENST00000461874 TRAV39A0A0B4J263 110 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 EFCAB10A6NFE3 127 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 GEMIN2O14893 280 aaKnown RBP15.12■□□□□ 0.01
VARS-220ENST00000461874 ZNF780AO75290 641 aaPredicted RBP15.12■□□□□ 0.01
VARS-220ENST00000461874 AMY1AP04745 511 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 AMY2AP04746 511 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 SERPINA2P20848 420 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 BEAN1Q3B7T3 259 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 SAMD5Q5TGI4 173 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 LINC00596Q86U02 117 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 OR5AU1Q8NGC0 362 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 OR10A7Q8NGE5 316 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 LEAP2Q969E1 77 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 RPEQ96AT9 228 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 PCDHB16Q9NRJ7 776 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 CKLFQ9UBR5 152 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 PSG11Q9UQ72 335 aa15.12■□□□□ 0.01
VARS-220ENST00000461874 AMMECR1Q9Y4X0 333 aaPredicted RBP15.12■□□□□ 0.01
VARS-220ENST00000461874 TRAV8-7A0A075B6U6 113 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 TRBV5-7A0A0A0MS05 114 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 MAGEA13PA6NCF6 341 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 IGHV3-7P01780 117 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 GNAO1P09471 354 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 FAM106CPP0CH98 169 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 SSTR5P35346 364 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 CAPGP40121 348 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 CD83Q01151 205 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 LTC4SQ16873 150 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 ABCA11PQ4W5N1 156 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 KPRPQ5T749 579 aaPredicted RBP15.11■□□□□ 0.01
VARS-220ENST00000461874 LAIR2Q6ISS4 152 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 SLC16A12Q6ZSM3 486 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 THNSL2Q86YJ6 484 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 OR4F17Q8NGA8 305 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 TOMM40LQ969M1 308 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 R3HDM4Q96D70 268 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 OR4F4Q96R69 305 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 CNOT2Q9NZN8 540 aaKnown RBP15.11■□□□□ 0.01
VARS-220ENST00000461874 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.11■□□□□ 0.01
VARS-220ENST00000461874 PLXNB1O43157 2135 aa15.11■□□□□ 0.01
VARS-220ENST00000461874 A0A1W2PP11 408 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 FAM90A18PA6NE21 464 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 FAM90A16PA6NEW6 464 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 FAM90A20PA6NIJ5 464 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 FAM90A9PA6NNJ1 464 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 FAM90A12PA8MX19 464 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 FAM90A5PA8MXJ8 464 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 XPNPEP2O43895 674 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 LPLP06858 475 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 FAM90A15PP0C7V4 464 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 FAM90A13PP0C7W8 464 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 FAM90A14PP0C7W9 464 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 FAM90A24PP0C7X0 464 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 GTF2F2P13984 249 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 FSTP19883 344 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 GZMHP20718 246 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 TAS2R43P59537 309 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 MADCAM1Q13477 382 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 MPV17LQ2QL34 196 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 SLC22A6Q4U2R8 563 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 CENPVQ7Z7K6 275 aaPredicted RBP15.1■□□□□ 0.01
VARS-220ENST00000461874 C8orf59Q8N0T1 100 aaPredicted RBP15.1■□□□□ 0.01
VARS-220ENST00000461874 FBLIM1Q8WUP2 373 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 PSORS1C1Q9UIG5 152 aa15.1■□□□□ 0.01
VARS-220ENST00000461874 TMEM30CPA0ZSE6 113 aa15.09■□□□□ 0.01
VARS-220ENST00000461874 SH2D7A6NKC9 451 aaPredicted RBP15.09■□□□□ 0.01
VARS-220ENST00000461874 M0QZK8 103 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms