RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 MARCOQ9UEW3 520 aaPredicted RBP2.13□□□□□ -2.07
CLK1-206ENST00000461326 HMGXB4Q9UGU5 601 aa2.13□□□□□ -2.07
CLK1-206ENST00000461326 ANXA10Q9UJ72 324 aa2.13□□□□□ -2.07
CLK1-206ENST00000461326 RAB22AQ9UL26 194 aa2.13□□□□□ -2.07
CLK1-206ENST00000461326 RBMX2Q9Y388 322 aaKnown RBP2.13□□□□□ -2.07
CLK1-206ENST00000461326 DOCK3Q8IZD9 2030 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 LAMA2P24043 3122 aaKnown RBP2.12□□□□□ -2.07
CLK1-206ENST00000461326 LOC102724200A0A096LPH7 203 aaPredicted RBP2.12□□□□□ -2.07
CLK1-206ENST00000461326 ERICH2A1L162 156 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 MGAT4DA6NG13 374 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 YKT6O15498 198 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 SC5DO75845 299 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 CD8AP01732 235 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 IGHV1-46P01743 117 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 LIPCP11150 499 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 SPAM1P38567 509 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 NUDT2P50583 147 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 XIAPP98170 497 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 IL5RAQ01344 420 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 USF2Q15853 346 aaPredicted RBP2.12□□□□□ -2.07
CLK1-206ENST00000461326 LINC00303Q3SY05 128 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 KRTAP13-2Q52LG2 175 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 CLEC12AQ5QGZ9 265 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 MRPL2Q5T653 305 aaKnown RBP2.12□□□□□ -2.07
CLK1-206ENST00000461326 KCTD16Q68DU8 428 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 C16orf47Q6ZP98 133 aaPredicted RBP2.12□□□□□ -2.07
CLK1-206ENST00000461326 CYP4Z1Q86W10 505 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 PDPNQ86YL7 162 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 CCNYL1Q8N7R7 359 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 OR8A1Q8NGG7 326 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 UBA3Q8TBC4 463 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 TMEM239Q8WW34 195 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 RMI2Q96E14 147 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 WDR34Q96EX3 536 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 ADTRPQ96IZ2 230 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 ZFP3Q96NJ6 502 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 SPACA5Q96QH8 159 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 METTL26Q96S19 204 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 RDH14Q9HBH5 336 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 SDHAF3Q9NRP4 125 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 AGPAT3Q9NRZ7 376 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 RBM22Q9NW64 420 aaKnown RBP eCLIP2.12□□□□□ -2.07
CLK1-206ENST00000461326 CHMP5Q9NZZ3 219 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 ZNF229Q9UJW7 825 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 ZNF236Q9UL36 1845 aa2.12□□□□□ -2.07
CLK1-206ENST00000461326 TMEM131Q92545 1883 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 LRRC37A2A6NM11 1700 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 LCTP09848 1927 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 KIR2DS1A0A191URI9 304 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 CEACAM18A8MTB9 384 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 K7EN84 100 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 K7ERQ8 282 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 LGALS9O00182 355 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 NEMFO60524 1076 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 CCL5P13501 91 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 ZNF14P17017 642 aaPredicted RBP2.11□□□□□ -2.07
CLK1-206ENST00000461326 CELP19835 753 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 HADHBP55084 474 aaKnown RBP2.11□□□□□ -2.07
CLK1-206ENST00000461326 CMC4P56277 68 aaPredicted RBP2.11□□□□□ -2.07
CLK1-206ENST00000461326 ELF3P78545 371 aaPredicted RBP2.11□□□□□ -2.07
CLK1-206ENST00000461326 SP6Q3SY56 376 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 ACBD4Q8NC06 268 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 OR4K2Q8NGD2 314 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 CCDC124Q96CT7 223 aaKnown RBP2.11□□□□□ -2.07
CLK1-206ENST00000461326 YIPF6Q96EC8 236 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 QKIQ96PU8 341 aaKnown RBP eCLIP2.11□□□□□ -2.07
CLK1-206ENST00000461326 ING2Q9H160 280 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 ABCB9Q9NP78 766 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 DDIT4Q9NX09 232 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 STX18Q9P2W9 335 aaKnown RBP2.11□□□□□ -2.07
CLK1-206ENST00000461326 RWDD2AQ9UIY3 292 aa2.11□□□□□ -2.07
CLK1-206ENST00000461326 MCM3APO60318 1980 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 SVILO95425 2214 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 DOCK5Q9H7D0 1870 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 GMNCA6NCL1 334 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 OR2AT4A6NND4 320 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 CD300LBA8K4G0 201 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 MFNGO00587 321 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 PLPP3O14495 311 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 OR2A4O95047 310 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 CST4P01036 141 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 IGLV7-43P04211 117 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 GIMD1P0DJR0 217 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 TGM4P49221 684 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 TTPAP49638 278 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 MEF2CQ06413 473 aaPredicted RBP2.1□□□□□ -2.07
CLK1-206ENST00000461326 C2orf80Q0P641 193 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 STX4Q12846 297 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 GUSBP1Q15486 140 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 TNXAQ16473 311 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 ZNF404Q494X3 552 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 CLLU1OSQ5K130 101 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 ZNF678Q5SXM1 525 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 PRR9Q5T870 116 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 LRRC8AQ8IWT6 810 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 STK40Q8N2I9 435 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 SPICQ8N5J4 248 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 ZNF420Q8TAQ5 688 aaPredicted RBP2.1□□□□□ -2.07
CLK1-206ENST00000461326 FAM57AQ8TBR7 257 aa2.1□□□□□ -2.07
CLK1-206ENST00000461326 SMIM8Q96KF7 97 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms