RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, human

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP98-208	ENST00000461047	C19orf18	Q8NEA5	215 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	WFDC11	Q8NEX6	87 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	OR10R2	Q8NGX6	335 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	NDNF	Q8TB73	568 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	LGALS14	Q8TCE9	139 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	C18orf12	Q96KH6	178 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	GAFA1	Q96PS6	74 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	GFI1	Q99684	422 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	NKX3-1	Q99801	234 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	NCOR1P1	Q9H4R4	102 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	RHBDL2	Q9NX52	303 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	DCAF16	Q9NXF7	216 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	ETAA1	Q9NY74	926 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	A3GALT2	U3KPV4	340 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	TENM4	Q6N022	2769 aa		4.93	□□□□□ -1.62
NUP98-208	ENST00000461047	DSCAM	O60469	2012 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	RTTN	Q86VV8	2226 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	TRAV18	A0A075B6X5	111 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	MEIKIN	A0A087WXM9	373 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	PPIAL4C	A0A0B4J2A2	164 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	IGHV4-61	A0A0C4DH41	118 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047		A0A0G2JMP0	313 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047		A0A0X1KG70	313 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	KIR2DS1	A0A191URI9	304 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047		F5H0A9	414 aa	Predicted RBP	4.92	□□□□□ -1.62
NUP98-208	ENST00000461047		J3QLI3	93 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	SLC33A1	O00400	549 aa	Predicted RBP	4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	TNFRSF13B	O14836	293 aa	Predicted RBP	4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	LDLRAD4	O15165	306 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	SPINT2	O43291	252 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	XRCC3	O43542	346 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	PAH	P00439	452 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	MSMB	P08118	114 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	PPIAL4G	P0DN37	164 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	HNF1A	P20823	631 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	CBX5	P45973	191 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	P2RX3	P56373	397 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	GNG2	P59768	71 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	RPL31	P62899	125 aa	Known RBP	4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	LCN2	P80188	198 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	MRPS10	P82664	201 aa	Known RBP	4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	QRFP	P83859	136 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	EDDM3A	Q14507	147 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	PNLIPRP3	Q17RR3	467 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	TMEM249	Q2WGJ8	235 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	CDNF	Q49AH0	187 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	TMEM69	Q5SWH9	247 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	C6orf183	Q5T699	404 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	DCAF12L2	Q5VW00	463 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	SLC35E4	Q6ICL7	350 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	OR52W1	Q6IF63	320 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047		Q6P435	159 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	C1orf122	Q6ZSJ8	110 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	BTN2A1	Q7KYR7	527 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	MOB1B	Q7L9L4	216 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	RNF144B	Q7Z419	303 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	FAM185A	Q8N0U4	392 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	FAM216B	Q8N7L0	139 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	OR4M2	Q8NGB6	313 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	DYNC2LI1	Q8TCX1	351 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	SEH1L	Q96EE3	360 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	C1orf147	Q96MC9	270 aa	Predicted RBP	4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	CMSS1	Q9BQ75	279 aa	Known RBP	4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	DCUN1D5	Q9BTE7	237 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	FAAP24	Q9BTP7	215 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	LPAR5	Q9H1C0	372 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	ABCG5	Q9H222	651 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	PPA2	Q9H2U2	334 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	GAL3ST2	Q9H3Q3	398 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	ZNF222	Q9UK12	451 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	TRAPPC2L	Q9UL33	140 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	KCNS2	Q9ULS6	477 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	MRPS7	Q9Y2R9	242 aa	Known RBP	4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	MAB21L2	Q9Y586	359 aa		4.92	□□□□□ -1.62
NUP98-208	ENST00000461047	BSN	Q9UPA5	3926 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	ROS1	P08922	2347 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	TRAV24	A0A0B4J272	114 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047		A0A1W2PP11	408 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047		A0A1W2PRX2	142 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	ODAM	A1E959	279 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	UBE2QL1	A1L167	161 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047		A8MXK9	166 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	HSPB6	O14558	160 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	SOCS1	O15524	211 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	PHF1	O43189	567 aa	Predicted RBP	4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	ORC5	O43913	435 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	ZNF737	O75373	536 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	HIST1H1D	P16402	221 aa	Known RBP	4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	CHAT	P28329	748 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	PRSS3	P35030	304 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	TGFBR1	P36897	503 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	KIR2DS4	P43632	304 aa		4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	CEBPD	P49716	269 aa	Predicted RBP	4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	DVL1P1	P54792	670 aa	Predicted RBP	4.91	□□□□□ -1.62
NUP98-208	ENST00000461047	PAX5	Q02548	391 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms