RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ZNF343Q6P1L6 599 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 OSR2Q8N2R0 312 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 GPHA2Q96T91 129 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 OTOGLQ3ZCN5 2332 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 SERPINE3A8MV23 424 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 C3orf80F5H4A9 247 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 EREGO14944 169 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST1H2BKO60814 126 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 TRGC2P03986 189 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST1H2BJP06899 126 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 CD46P15529 392 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST1H2BOP23527 126 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 GNRHRP30968 328 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 IL2RGP31785 369 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST1H2BBP33778 126 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 GNG10P50151 68 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST1H2BDP58876 126 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST1H2BCP62807 126 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST2H2BEQ16778 126 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.34□□□□□ -0.27
LMNB1-203ENST00000460265 ZNF611Q8N823 705 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST1H2BHQ93079 126 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST1H2BNQ99877 126 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST1H2BMQ99879 126 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 NDUFAF3Q9BU61 184 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 SF3B5Q9BWJ5 86 aaKnown RBP13.34□□□□□ -0.27
LMNB1-203ENST00000460265 MYOZ1Q9NP98 299 aaPredicted RBP13.34□□□□□ -0.27
LMNB1-203ENST00000460265 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.34□□□□□ -0.27
LMNB1-203ENST00000460265 AK3Q9UIJ7 227 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 UBE2J1Q9Y385 318 aaPredicted RBP13.34□□□□□ -0.27
LMNB1-203ENST00000460265 NUP210LQ5VU65 1888 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 XRCC2O43543 280 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 APLNRP35414 380 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 TAGLN2P37802 199 aaKnown RBP13.34□□□□□ -0.27
LMNB1-203ENST00000460265 COTL1Q14019 142 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 HIST3H2BBQ8N257 126 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 TMEM54Q969K7 222 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 MED19A0JLT2 244 aaPredicted RBP13.33□□□□□ -0.27
LMNB1-203ENST00000460265 PHF1O43189 567 aaPredicted RBP13.33□□□□□ -0.27
LMNB1-203ENST00000460265 PTBP3O95758 552 aaKnown RBP13.33□□□□□ -0.27
LMNB1-203ENST00000460265 SP9P0CG40 484 aa13.33□□□□□ -0.27
LMNB1-203ENST00000460265 HLA-GP17693 338 aa13.33□□□□□ -0.27
LMNB1-203ENST00000460265 C10orf128Q5T292 105 aa13.33□□□□□ -0.27
LMNB1-203ENST00000460265 MKXQ8IYA7 352 aa13.33□□□□□ -0.27
LMNB1-203ENST00000460265 SUMF2Q8NBJ7 301 aa13.33□□□□□ -0.27
LMNB1-203ENST00000460265 NABP1Q96AH0 204 aa13.33□□□□□ -0.27
LMNB1-203ENST00000460265 IGKV1D-8A0A087WSZ0 117 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 A0A0U1RQV5 110 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 KLRC4-KLRK1H3BQV0 150 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 TBPP20226 339 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 OMGP23515 440 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 MEOX1P50221 254 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 PMP22Q01453 160 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 PRSS54Q6PEW0 395 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 DDA1Q9BW61 102 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 PRO3102Q9H379 93 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 OR14J1Q9UGF5 321 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 A8MWP6 167 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 TRAPPC2LH3BP13 241 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 CD37P11049 281 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 CHATP28329 748 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 HOGA1Q86XE5 327 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 DTX1Q86Y01 620 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 SLC5A7Q9GZV3 580 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 ZNF286AQ9HBT8 521 aa13.33□□□□□ -0.28
LMNB1-203ENST00000460265 LRRC3CA6NJW4 275 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 ZNF732B4DXR9 585 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 NGFP01138 241 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 IDH3GP51553 393 aaPredicted RBP13.32□□□□□ -0.28
LMNB1-203ENST00000460265 PPA1Q15181 289 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 HIKESHIQ53FT3 197 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 TMEM251Q8N6I4 163 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 SPSB1Q96BD6 273 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 TTTY12Q9BZ98 90 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 NMES1Q9C002 83 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 SLC35B3Q9H1N7 401 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 TMEM9BQ9NQ34 198 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 FAM212BQ9NTI7 297 aaPredicted RBP13.32□□□□□ -0.28
LMNB1-203ENST00000460265 ELOA3CA0A087WX78 387 aaPredicted RBP13.32□□□□□ -0.28
LMNB1-203ENST00000460265 ZNF816-ZNF321PA0A0X1KG74 233 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 FAM157AC9JC47 383 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 SFT2D2O95562 160 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 CST2P09228 141 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 NPBWR2P48146 333 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 ASCL1P50553 236 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 QRFPP83859 136 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 CLN3Q13286 438 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 RSPO1Q2MKA7 263 aaPredicted RBP13.32□□□□□ -0.28
LMNB1-203ENST00000460265 RTN4IP1Q8WWV3 396 aaPredicted RBP13.32□□□□□ -0.28
LMNB1-203ENST00000460265 EMG1Q92979 244 aaKnown RBP13.32□□□□□ -0.28
LMNB1-203ENST00000460265 NTNG2Q96CW9 530 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 GALNT14Q96FL9 552 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 FER1L6-AS2Q96M78 137 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 ZPBPQ9BS86 351 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 PBDC1Q9BVG4 233 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 WNT5BQ9H1J7 359 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 GPR132Q9UNW8 380 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 TNFSF12O43508 249 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 ACP1P24666 158 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 ZNF133P52736 654 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms