RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 FAM106CPP0CH98 169 aa18.14■□□□□ 0.49
PTPN4-207ENST00000460162 SMN1Q16637 294 aaKnown RBP18.14■□□□□ 0.49
PTPN4-207ENST00000460162 TCTEX1D4Q5JR98 221 aa18.14■□□□□ 0.49
PTPN4-207ENST00000460162 THNSL2Q86YJ6 484 aa18.14■□□□□ 0.49
PTPN4-207ENST00000460162 PLPPR1Q8TBJ4 325 aa18.14■□□□□ 0.49
PTPN4-207ENST00000460162 SMIM19Q96E16 107 aa18.14■□□□□ 0.49
PTPN4-207ENST00000460162 IFT22Q9H7X7 185 aa18.14■□□□□ 0.49
PTPN4-207ENST00000460162 TMEM138Q9NPI0 162 aa18.14■□□□□ 0.49
PTPN4-207ENST00000460162 FAM90A18PA6NE21 464 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 FAM90A16PA6NEW6 464 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 FAM90A20PA6NIJ5 464 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 FAM90A9PA6NNJ1 464 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 FAM90A12PA8MX19 464 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 FAM90A5PA8MXJ8 464 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 HTR3BO95264 441 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 FAM90A15PP0C7V4 464 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 FAM90A13PP0C7W8 464 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 FAM90A14PP0C7W9 464 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 FAM90A24PP0C7X0 464 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 CD33P20138 364 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 MADCAM1Q13477 382 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 DDI2Q5TDH0 399 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 SLC16A12Q6ZSM3 486 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 LINC00596Q86U02 117 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 WFDC9Q8NEX5 89 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 MRGPRDQ8TDS7 321 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 SGCDQ92629 289 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 MYDGFQ969H8 173 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 PSG11Q9UQ72 335 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 ST3GAL6Q9Y274 331 aa18.13■□□□□ 0.49
PTPN4-207ENST00000460162 A0A1W2PPI3 338 aa18.12■□□□□ 0.49
PTPN4-207ENST00000460162 TCRBV4S1A1TA0A5B7 111 aa18.12■□□□□ 0.49
PTPN4-207ENST00000460162 SSTR5P35346 364 aa18.12■□□□□ 0.49
PTPN4-207ENST00000460162 ZNF93P35789 620 aaPredicted RBP18.12■□□□□ 0.49
PTPN4-207ENST00000460162 ETV1P50549 477 aa18.12■□□□□ 0.49
PTPN4-207ENST00000460162 RAB7AP51149 207 aa18.12■□□□□ 0.49
PTPN4-207ENST00000460162 RBM11P57052 281 aaKnown RBP18.12■□□□□ 0.49
PTPN4-207ENST00000460162 OR2G6Q5TZ20 316 aa18.12■□□□□ 0.49
PTPN4-207ENST00000460162 OR56B4Q8NH76 319 aa18.12■□□□□ 0.49
PTPN4-207ENST00000460162 DPCDQ9BVM2 203 aaPredicted RBP18.12■□□□□ 0.49
PTPN4-207ENST00000460162 METTL9Q9H1A3 318 aa18.12■□□□□ 0.49
PTPN4-207ENST00000460162 PAK1IP1Q9NWT1 392 aaPredicted RBP18.12■□□□□ 0.49
PTPN4-207ENST00000460162 SH2D7A6NKC9 451 aaPredicted RBP18.11■□□□□ 0.49
PTPN4-207ENST00000460162 CDRT1O95170 752 aa18.11■□□□□ 0.49
PTPN4-207ENST00000460162 PF4P02776 101 aa18.11■□□□□ 0.49
PTPN4-207ENST00000460162 CSTBP04080 98 aaKnown RBP18.11■□□□□ 0.49
PTPN4-207ENST00000460162 SNRNP70P08621 437 aaKnown RBP18.11■□□□□ 0.49
PTPN4-207ENST00000460162 MYL12AP19105 171 aa18.11■□□□□ 0.49
PTPN4-207ENST00000460162 C9orf152Q5JTZ5 239 aa18.11■□□□□ 0.49
PTPN4-207ENST00000460162 OR8H3Q8N146 312 aa18.11■□□□□ 0.49
PTPN4-207ENST00000460162 OSR2Q8N2R0 312 aa18.11■□□□□ 0.49
PTPN4-207ENST00000460162 SUMF2Q8NBJ7 301 aa18.11■□□□□ 0.49
PTPN4-207ENST00000460162 MRAPQ8TCY5 172 aa18.11■□□□□ 0.49
PTPN4-207ENST00000460162 LEAP2Q969E1 77 aa18.11■□□□□ 0.49
PTPN4-207ENST00000460162 AURKAIP1Q9NWT8 199 aaPredicted RBP18.11■□□□□ 0.49
PTPN4-207ENST00000460162 DIMT1Q9UNQ2 313 aaKnown RBP18.11■□□□□ 0.49
PTPN4-207ENST00000460162 ZNF281Q9Y2X9 895 aa18.11■□□□□ 0.49
PTPN4-207ENST00000460162 EXOSC1Q9Y3B2 195 aaKnown RBP18.11■□□□□ 0.49
PTPN4-207ENST00000460162 OR7C1O76099 320 aaPredicted RBP18.1■□□□□ 0.49
PTPN4-207ENST00000460162 BDKRB2P30411 391 aa18.1■□□□□ 0.49
PTPN4-207ENST00000460162 GNG10P50151 68 aa18.1■□□□□ 0.49
PTPN4-207ENST00000460162 LTC4SQ16873 150 aa18.1■□□□□ 0.49
PTPN4-207ENST00000460162 MPV17LQ2QL34 196 aa18.1■□□□□ 0.49
PTPN4-207ENST00000460162 OR52N1Q8NH53 320 aa18.1■□□□□ 0.49
PTPN4-207ENST00000460162 S100A13Q99584 98 aa18.1■□□□□ 0.49
PTPN4-207ENST00000460162 TMEM30CPA0ZSE6 113 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 EBAG9O00559 213 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 OGG1O15527 345 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 FGF16O43320 207 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 ZNF780AO75290 641 aaPredicted RBP18.09■□□□□ 0.49
PTPN4-207ENST00000460162 IGHV3-7P01780 117 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 SLC35A2P78381 396 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 RIPK1Q13546 671 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 KHDC1LQ5JSQ8 128 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 DRAM1Q8N682 238 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 OR10X1Q8NGY0 326 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 RFESDQ8TAC1 157 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 BABAM2Q9NXR7 383 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 ZNF581Q9P0T4 197 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 ING4Q9UNL4 249 aa18.09■□□□□ 0.49
PTPN4-207ENST00000460162 SIRT4Q9Y6E7 314 aaPredicted RBP18.09■□□□□ 0.49
PTPN4-207ENST00000460162 TRBV5-5A0A0J9YX44 114 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 GEMIN2O14893 280 aaKnown RBP18.08■□□□□ 0.48
PTPN4-207ENST00000460162 BAG2O95816 211 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 CLIC3O95833 236 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 TMEM11P17152 192 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 GZMHP20718 246 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 SERPINA2P20848 420 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 LOXL3P58215 753 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 MED21Q13503 144 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 HES1Q14469 280 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 FOXB2Q5VYV0 432 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 C10orf99Q6UWK7 81 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 C5orf56Q8N8D9 126 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 ZNF184Q99676 751 aaPredicted RBP18.08■□□□□ 0.48
PTPN4-207ENST00000460162 CKLFQ9UBR5 152 aa18.08■□□□□ 0.48
PTPN4-207ENST00000460162 PSMB11A5LHX3 300 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 HSD17B6O14756 317 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 LALBAP00709 142 aa18.07■□□□□ 0.48
PTPN4-207ENST00000460162 IGLL1P15814 213 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms