RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PRSS54Q6PEW0 395 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 LRRN1Q6UXK5 716 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 APCDD1LQ8NCL9 501 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 ATP6V1C2Q8NEY4 427 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 OR5L1Q8NGL2 311 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 NELFBQ8WX92 580 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 STACQ99469 402 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 HOPXQ9BPY8 73 aaPredicted RBP3.07□□□□□ -1.92
CCDC50-203ENST00000460064 CDCA4Q9BXL8 241 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 COA1Q9GZY4 146 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 FAM107BQ9H098 131 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 XPNPEP1Q9NQW7 623 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 FGFR1OP2Q9NVK5 253 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 SDHAF2Q9NX18 166 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 VAPAQ9P0L0 249 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 USH1CQ9Y6N9 552 aa3.07□□□□□ -1.92
CCDC50-203ENST00000460064 EIF3AQ14152 1382 aaKnown RBP3.07□□□□□ -1.92
CCDC50-203ENST00000460064 KIR2DS1A0A191URI9 304 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 NDUFA2O43678 99 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 SHOX2O60902 331 aaPredicted RBP3.06□□□□□ -1.92
CCDC50-203ENST00000460064 APOEP02649 317 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 CALB1P05937 261 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 CD5P06127 495 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 HIST1H1CP16403 213 aaKnown RBP3.06□□□□□ -1.92
CCDC50-203ENST00000460064 CRABP2P29373 138 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 SERPINB1P30740 379 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 IDH3GP51553 393 aaPredicted RBP3.06□□□□□ -1.92
CCDC50-203ENST00000460064 COL4A4P53420 1690 aaPredicted RBP3.06□□□□□ -1.92
CCDC50-203ENST00000460064 AQP5P55064 265 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 BTN1A1Q13410 526 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 FLOT2Q14254 428 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 SHHQ15465 462 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 FBXL19-AS1Q494R0 122 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 CCDC153Q494R4 210 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 DNLZQ5SXM8 178 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 LPCAT4Q643R3 524 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 FAM45BPQ6NSW5 357 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 MED27Q6P2C8 311 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 PBRM1Q86U86 1689 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 NT5DC3Q86UY8 548 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 BLIDQ8IZY5 108 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 CA13Q8N1Q1 262 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 MIR7-3HGQ8N6C7 128 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 TMEM109Q9BVC6 243 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 TMED9Q9BVK6 235 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 ULBP1Q9BZM6 244 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 MFSD1Q9H3U5 465 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 RDH14Q9HBH5 336 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 CA10Q9NS85 328 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 SMPXQ9UHP9 88 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 RAB22AQ9UL26 194 aa3.06□□□□□ -1.92
CCDC50-203ENST00000460064 SCN4AP35499 1836 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 ZNF729A6NN14 1252 aaPredicted RBP3.05□□□□□ -1.92
CCDC50-203ENST00000460064 CDIPTO14735 213 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 STX10O60499 249 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 ATP6V1G2O95670 118 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 HLA-AP01891 365 aaKnown RBP3.05□□□□□ -1.92
CCDC50-203ENST00000460064 GUSBP08236 651 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 LIMS3P0CW19 117 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 LIMS4P0CW20 117 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 C8orf88P0DMB2 117 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 UGT2B7P16662 529 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 NELFEP18615 380 aaKnown RBP3.05□□□□□ -1.92
CCDC50-203ENST00000460064 ELF3P78545 371 aaPredicted RBP3.05□□□□□ -1.92
CCDC50-203ENST00000460064 TNFRSF9Q07011 255 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 GUSBP1Q15486 140 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 TMEM176BQ3YBM2 270 aaPredicted RBP3.05□□□□□ -1.92
CCDC50-203ENST00000460064 CDNFQ49AH0 187 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 SPIN3Q5JUX0 258 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 PDPNQ86YL7 162 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 PXT1Q8NFP0 134 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 OR2M7Q8NG81 312 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 OR11L1Q8NGX0 322 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 NT5CQ8TCD5 201 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 IFT81Q8WYA0 676 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 TLCD1Q96CP7 247 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 RMND5BQ96G75 393 aaPredicted RBP3.05□□□□□ -1.92
CCDC50-203ENST00000460064 ADTRPQ96IZ2 230 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 HBEGFQ99075 208 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 GPR22Q99680 433 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 MRPS26Q9BYN8 205 aaKnown RBP3.05□□□□□ -1.92
CCDC50-203ENST00000460064 TRIM4Q9C037 500 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 TRABDQ9H4I3 376 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 DHX35Q9H5Z1 703 aaKnown RBP3.05□□□□□ -1.92
CCDC50-203ENST00000460064 SLC2A9Q9NRM0 540 aa3.05□□□□□ -1.92
CCDC50-203ENST00000460064 MARCOQ9UEW3 520 aaPredicted RBP3.05□□□□□ -1.92
CCDC50-203ENST00000460064 PAIP2BQ9ULR5 123 aaKnown RBP3.05□□□□□ -1.92
CCDC50-203ENST00000460064 KIAA0232Q92628 1395 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 IGKV1-6A0A0C4DH72 117 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 TINCRA0A1B0GVN0 87 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 ZNF98A6NK75 572 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 M0R1B8 84 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 CXCR6O00574 342 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 AZIN1O14977 448 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 BIRC5O15392 142 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 KLRC4O43908 158 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 OR7C2O60412 319 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 FADS1O60427 444 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 RAB36O95755 333 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 LHBP01229 141 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms