RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 H0YJX3 145 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 IL1AP01583 271 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 GAPDHP04406 335 aaKnown RBP9.69□□□□□ -0.86
GPNMB-204ENST00000459927 RPLP1P05386 114 aaKnown RBP9.69□□□□□ -0.86
GPNMB-204ENST00000459927 GZMHP20718 246 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 CDX1P47902 265 aaPredicted RBP9.69□□□□□ -0.86
GPNMB-204ENST00000459927 ALKBH1Q13686 389 aaKnown RBP9.69□□□□□ -0.86
GPNMB-204ENST00000459927 LTC4SQ16873 150 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 NKAPLQ5M9Q1 402 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 FOXRED2Q8IWF2 684 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 Q8NFD4 153 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 PXT1Q8NFP0 134 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 RNFT2Q96EX2 444 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 PELI1Q96FA3 418 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 EAF1Q96JC9 268 aaPredicted RBP9.69□□□□□ -0.86
GPNMB-204ENST00000459927 GABARAPL3Q9BY60 117 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 PLSCR3Q9NRY6 295 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 SCOCQ9UIL1 159 aa9.69□□□□□ -0.86
GPNMB-204ENST00000459927 EXOGQ9Y2C4 368 aaKnown RBP9.69□□□□□ -0.86
GPNMB-204ENST00000459927 TRAV39A0A0B4J263 110 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 A0A1W2PPE3 182 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 NCBP2LA6PVI3 153 aaKnown RBP9.68□□□□□ -0.86
GPNMB-204ENST00000459927 HSPB6O14558 160 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 PAX5Q02548 391 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 ZNF816Q0VGE8 651 aaPredicted RBP9.68□□□□□ -0.86
GPNMB-204ENST00000459927 PAN3Q58A45 887 aaKnown RBP9.68□□□□□ -0.86
GPNMB-204ENST00000459927 ZNF691Q5VV52 312 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 RSBN1Q5VWQ0 802 aaPredicted RBP9.68□□□□□ -0.86
GPNMB-204ENST00000459927 ASCL4Q6XD76 172 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 LCNL1Q6ZST4 164 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 MOB3BQ86TA1 216 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 TGIF2LXQ8IUE1 241 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 PARP16Q8N5Y8 322 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 ACBD7Q8N6N7 88 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 PLPPR1Q8TBJ4 325 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 MRGPRDQ8TDS7 321 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 ABCG5Q9H222 651 aa9.68□□□□□ -0.86
GPNMB-204ENST00000459927 IGHV1-3A0A0C4DH29 117 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 AP4M1O00189 453 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 SULT1B1O43704 296 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 HCKP08631 526 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 RPSAP08865 295 aaKnown RBP9.67□□□□□ -0.86
GPNMB-204ENST00000459927 GLP1RP43220 463 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 GPR12P47775 334 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 KCNJ3P48549 501 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 GNG10P50151 68 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 RAB25P57735 213 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 SNRPGP62308 76 aaKnown RBP9.67□□□□□ -0.86
GPNMB-204ENST00000459927 C9orf66Q5T8R8 295 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 MEDAGQ5VYS4 303 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 LHFPL3Q86UP9 236 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 Q8N6K4 173 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 RNF152Q8N8N0 203 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 Q8N9W7 124 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 OR10X1Q8NGY0 326 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 CENPNQ96H22 339 aaPredicted RBP9.67□□□□□ -0.86
GPNMB-204ENST00000459927 C4orf36Q96KX1 117 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 GON7Q9BXV9 100 aa9.67□□□□□ -0.86
GPNMB-204ENST00000459927 ISG20L2Q9H9L3 353 aaKnown RBP9.67□□□□□ -0.86
GPNMB-204ENST00000459927 IGHV3-72A0A0B4J1Y9 119 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 C3orf84H3BNL1 204 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 CCRL2O00421 344 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 MPZL2O60487 215 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 ELANEP08246 267 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 CD1BP29016 333 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 ECI1P42126 302 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 LUMP51884 338 aaPredicted RBP9.66□□□□□ -0.86
GPNMB-204ENST00000459927 FOXE3Q13461 319 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 GPR50Q13585 617 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 GALEQ14376 348 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 IL13RA2Q14627 380 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 ZNF529Q6P280 563 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 SATL1Q86VE3 508 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 LINC00311Q8N616 119 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 SUMF2Q8NBJ7 301 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 OR5M8Q8NGP6 311 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 OR2T10Q8NGZ9 312 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 OR8U1Q8NH10 309 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 PRR25Q96S07 402 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 ASCL2Q99929 193 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 LIN7CQ9NUP9 197 aaKnown RBP9.66□□□□□ -0.86
GPNMB-204ENST00000459927 FAM118AQ9NWS6 357 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 OAZ3Q9UMX2 235 aa9.66□□□□□ -0.86
GPNMB-204ENST00000459927 E9PI62 339 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 C15orf65H3BRN8 121 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 HSD17B6O14756 317 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 HTR3BO95264 441 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 FCGR1AP12314 374 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 SSTR5P35346 364 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 REG1BP48304 166 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 RSU1Q15404 277 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 ZSCAN26Q16670 478 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 DEFB136Q30KP8 78 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 PIGYQ3MUY2 71 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 CXorf66Q5JRM2 361 aaPredicted RBP9.65□□□□□ -0.86
GPNMB-204ENST00000459927 C8orf31Q8N9H6 132 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 OR52M1Q8NGK5 317 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 OR10K1Q8NGX5 313 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 OR5AK2Q8NH90 309 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 ST6GALNAC6Q969X2 333 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms