RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CGB7P0DN87 165 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 GTF2F2P13984 249 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 SERPINA2P20848 420 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 MAPK3P27361 379 aaPredicted RBP12.99□□□□□ -0.33
COL7A1-203ENST00000459756 GDNFP39905 211 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 GLP1RP43220 463 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 MAP2K4P45985 399 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 DOC2BQ14184 412 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 MED22Q15528 200 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 C17orf58Q2M2W7 97 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 MPV17LQ2QL34 196 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 SLC22A6Q4U2R8 563 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 RSBN1Q5VWQ0 802 aaPredicted RBP12.99□□□□□ -0.33
COL7A1-203ENST00000459756 BAIAP2L2Q6UXY1 529 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 SUMF2Q8NBJ7 301 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 DPCDQ9BVM2 203 aaPredicted RBP12.99□□□□□ -0.33
COL7A1-203ENST00000459756 LINC00574Q9H8X3 128 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 ZNF286AQ9HBT8 521 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 VWFP04275 2813 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 MEGF11A6BM72 1044 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 LEUTXA8MZ59 168 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 H3BUI4 141 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 TOR1AO14656 332 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 GEMIN2O14893 280 aaKnown RBP12.98□□□□□ -0.33
COL7A1-203ENST00000459756 CEACAM3P40198 252 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 ARHGDIBP52566 201 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 EFNB2P52799 333 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 PRRX1P54821 245 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 CCBE1Q6UXH8 406 aaPredicted RBP12.98□□□□□ -0.33
COL7A1-203ENST00000459756 TMEM219Q86XT9 240 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 JAGN1Q8N5M9 183 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 OR13A1Q8NGR1 328 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 PLPPR1Q8TBJ4 325 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 MRPS24Q96EL2 167 aaKnown RBP12.98□□□□□ -0.33
COL7A1-203ENST00000459756 KIRREL1Q96J84 757 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 OR5M11Q96RB7 305 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 DUSP21Q9H596 190 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 CALYQ9NYX4 217 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 MRPS28Q9Y2Q9 187 aaKnown RBP12.98□□□□□ -0.33
COL7A1-203ENST00000459756 SIGLEC9Q9Y336 463 aa12.98□□□□□ -0.33
COL7A1-203ENST00000459756 MEGF8Q7Z7M0 2845 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 FAM172BPA6NC97 362 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 FAM90A22PA8MWA6 464 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 IL1AP01583 271 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 MAS1P04201 325 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 HSMCR30P0CW71 290 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 NFYBP25208 207 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 MS4A15Q8N5U1 240 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 NKAIN3Q8N8D7 197 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 OR9G1Q8NH87 305 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 MUL1Q969V5 352 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 SPACA1Q9HBV2 294 aa12.97□□□□□ -0.33
COL7A1-203ENST00000459756 NPIPB11E5RHQ5 1161 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 BUB1B-PAK6H3BSN5 160 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 PIN1P1O15428 100 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 JUNBP17275 347 aaPredicted RBP12.96□□□□□ -0.33
COL7A1-203ENST00000459756 BRS3P32247 399 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 SPHARQ15513 63 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 HLA-DRB5Q30154 266 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 ATAD3CQ5T2N8 411 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 AWAT2Q6E213 333 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 GLIPR1L1Q6UWM5 242 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 PRSS48Q7RTY5 328 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 Q8N2B8 174 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 OR10A7Q8NGE5 316 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 MRGPRDQ8TDS7 321 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 UQCC2Q9BRT2 126 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 ZNF702PQ9H963 129 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 IDI2-AS1Q9NZ38 188 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 ZNF581Q9P0T4 197 aa12.96□□□□□ -0.33
COL7A1-203ENST00000459756 LSM2Q9Y333 95 aaKnown RBP12.96□□□□□ -0.33
COL7A1-203ENST00000459756 A0A1W2PP11 408 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 TMEM30CPA0ZSE6 113 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 OOSP1A8MZH6 123 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 GZMHP20718 246 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 GABARAPL2P60520 117 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 GPR50Q13585 617 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 IRF3Q14653 427 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 HERPUD1Q15011 391 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 TPTE2P1Q5T6R2 138 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 CCDC144NLQ6NUI1 221 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 SLC16A12Q6ZSM3 486 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 Q6ZTK2 550 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 C16orf82Q7Z2V1 217 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 LYPD6Q86Y78 171 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 KLHDC1Q8N7A1 406 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 PRSS22Q9GZN4 317 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 MMP28Q9H239 520 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 MMP27Q9H306 513 aa12.95□□□□□ -0.34
COL7A1-203ENST00000459756 AMMECR1Q9Y4X0 333 aaPredicted RBP12.95□□□□□ -0.34
COL7A1-203ENST00000459756 LY6LH3BQJ8 138 aa12.94□□□□□ -0.34
COL7A1-203ENST00000459756 RBM39Q14498 530 aaKnown RBP12.94□□□□□ -0.34
COL7A1-203ENST00000459756 C2orf68Q2NKX9 166 aa12.94□□□□□ -0.34
COL7A1-203ENST00000459756 ACSM3Q53FZ2 586 aa12.94□□□□□ -0.34
COL7A1-203ENST00000459756 UNQ9370/PRO34162Q6UXP9 181 aa12.94□□□□□ -0.34
COL7A1-203ENST00000459756 RFESDQ8TAC1 157 aa12.94□□□□□ -0.34
COL7A1-203ENST00000459756 NEK7Q8TDX7 302 aa12.94□□□□□ -0.34
COL7A1-203ENST00000459756 PHYHIPQ92561 330 aa12.94□□□□□ -0.34
COL7A1-203ENST00000459756 AKR1E2Q96JD6 320 aa12.94□□□□□ -0.34
COL7A1-203ENST00000459756 TMED9Q9BVK6 235 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms