RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 FXYD4P59646 89 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 UBE2MP61081 183 aaKnown RBP4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 GNB2P62879 340 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 MEF2CQ06413 473 aaPredicted RBP4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 AESQ08117 197 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 PLA2G7Q13093 441 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 ESCO2Q56NI9 601 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 VAX1Q5SQQ9 334 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 FAHD2BQ6P2I3 314 aaPredicted RBP4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 CLEC2AQ6UVW9 174 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 RNF144BQ7Z419 303 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 WDR86Q86TI4 376 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 DTX2Q86UW9 622 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 C11orf53Q8IXP5 236 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 SLC38A6Q8IZM9 456 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 GCSAMQ8N6F7 178 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 GVQW1Q8N7I0 195 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 COQ8AQ8NI60 647 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 GIMAP1Q8WWP7 306 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 NEUROG1Q92886 237 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 GCDHQ92947 438 aaPredicted RBP4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 TRIM63Q969Q1 353 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 ARL11Q969Q4 196 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 FAHD2AQ96GK7 314 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZNF486Q96H40 463 aaPredicted RBP4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 BBC3Q96PG8 261 aaPredicted RBP4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 PHB2Q99623 299 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZNF2Q9BSG1 426 aaPredicted RBP4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 PIMREGQ9BSJ6 248 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 TRAF4Q9BUZ4 470 aaPredicted RBP4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 C20orf85Q9H1P6 137 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 GHITMQ9H3K2 345 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 NCOR1P1Q9H4R4 102 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 Q9N2K0 584 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 OR2S2Q9NQN1 319 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 COMMD9Q9P000 198 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 RCC2Q9P258 522 aaKnown RBP4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 GNG12Q9UBI6 72 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZNF230Q9UIE0 474 aaPredicted RBP4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZNF221Q9UK13 617 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 TBC1D24Q9ULP9 559 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 CACNA1DQ01668 2161 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 ARFGEF3Q5TH69 2177 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 SPEGQ15772 3267 aa4.91□□□□□ -1.62
RNU1-88P-201ENST00000459274 CFAP54Q96N23 3096 aa4.9□□□□□ -1.62
RNU1-88P-201ENST00000459274 CEP295Q9C0D2 2601 aa4.9□□□□□ -1.62
RNU1-88P-201ENST00000459274 A0A0A6YYD4 124 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 TRBV6-6A0A0A6YYG2 114 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 TRAV24A0A0B4J272 114 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 A1L4Q6 167 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 WIPF3A6NGB9 483 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 ZNF729A6NN14 1252 aaPredicted RBP4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 F8VVB4 439 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 F8VWA3 439 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 K7N7A8 449 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 SDCBPO00560 298 aaPredicted RBP4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 TOR1AO14656 332 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 LANCL1O43813 399 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 B3GALNT1O75752 331 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 FSTL3O95633 263 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 C4BPBP20851 252 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 DNASE1P24855 282 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 FPR2P25090 351 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 IL3RAP26951 378 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 ERP29P30040 261 aaKnown RBP4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 CEACAM6P40199 344 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 RAB7AP51149 207 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 PRRX1P54821 245 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 RPL31P62899 125 aaKnown RBP4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 SRPXP78539 464 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 HLA-DRB3P79483 266 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 CYCSP99999 105 aaKnown RBP4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 CATR1Q13166 79 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 CDSNQ15517 529 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 TATDN3Q17R31 274 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 C11orf91Q3C1V1 193 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 TMEM128Q5BJH2 165 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 ATPAF1Q5TC12 328 aaPredicted RBP4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 TEX36Q5VZQ5 186 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 SIGIRRQ6IA17 410 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 Q6P435 159 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 DHRS11Q6UWP2 260 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 ZNF497Q6ZNH5 498 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 Q6ZNX1 250 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 DNM1P46Q6ZS02 220 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 Q6ZS49 121 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 OVCH2Q7RTZ1 564 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 AKAP14Q86UN6 197 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 ZCCHC24Q8N2G6 241 aaKnown RBP4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 ZNRF1Q8ND25 227 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 ANGPTL6Q8NI99 470 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 RNASE11Q8TAA1 199 aaKnown RBP4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 FAM216AQ8WUB2 273 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 FAM168AQ92567 244 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 TOMM40LQ969M1 308 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 C14orf79Q96F83 325 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 NEIL1Q96FI4 390 aaPredicted RBP4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 SDSLQ96GA7 329 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 CCL13Q99616 98 aa4.9□□□□□ -1.63
RNU1-88P-201ENST00000459274 MARVELD1Q9BSK0 173 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms