RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 IGKV1-13P0DP09 117 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 MDH2P40926 338 aaKnown RBP14.18□□□□□ -0.14
CCDC43-202ENST00000457422 SULT1A2P50226 295 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 BTN1A1Q13410 526 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 DEFB109BQ30KR1 87 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 GAPTQ8N292 157 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 C1orf162Q8NEQ5 155 aaPredicted RBP14.18□□□□□ -0.14
CCDC43-202ENST00000457422 SARAFQ96BY9 339 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 POMT1Q9Y6A1 747 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 SIGLEC5O15389 551 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 SELEP16581 610 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 KIR2DL2P43627 348 aaPredicted RBP14.18□□□□□ -0.14
CCDC43-202ENST00000457422 SPIN3Q5JUX0 258 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 SHEQ5VZ18 495 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 C9orf106Q8NAJ2 232 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 SLC25A40Q8TBP6 338 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 WNT2BQ93097 391 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 ARV1Q9H2C2 271 aa14.18□□□□□ -0.14
CCDC43-202ENST00000457422 TMEM218A2RU14 115 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 NPIPB11E5RHQ5 1161 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 DEGS1O15121 323 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 CEACAM4O75871 244 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 CBR1P16152 277 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 UCP1P25874 307 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 UCP2P55851 309 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 SCCPDHQ8NBX0 429 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 DMBX1Q8NFW5 382 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 ERGIC1Q969X5 290 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 SPIN2AQ99865 258 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 SPIN2BQ9BPZ2 258 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 ZDHHC8Q9ULC8 765 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 UBE2J1Q9Y385 318 aaPredicted RBP14.17□□□□□ -0.14
CCDC43-202ENST00000457422 LOC400499M0QZD8 3231 aa14.17□□□□□ -0.14
CCDC43-202ENST00000457422 PRR33A8MZF0 331 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 IGKV3-15P01624 115 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 PGA5P0DJD9 388 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 ZNF44P15621 663 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 TAGLNQ01995 201 aaKnown RBP14.16□□□□□ -0.14
CCDC43-202ENST00000457422 PJVKQ0ZLH3 352 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 ALKBH6Q3KRA9 238 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 ZNF324BQ6AW86 544 aaPredicted RBP14.16□□□□□ -0.14
CCDC43-202ENST00000457422 VWA1Q6PCB0 445 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 MOB1BQ7L9L4 216 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 H1FOOQ8IZA3 346 aaPredicted RBP14.16□□□□□ -0.14
CCDC43-202ENST00000457422 SELENOHQ8IZQ5 122 aaKnown RBP14.16□□□□□ -0.14
CCDC43-202ENST00000457422 ABHD14BQ96IU4 210 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 NRIP2Q9BQI9 281 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 ADAT1Q9BUB4 502 aaKnown RBP14.16□□□□□ -0.14
CCDC43-202ENST00000457422 SMIM3Q9BZL3 60 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 C11orf1Q9H5F2 150 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 CLEC18AA5D8T8 446 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 ZNF146Q15072 292 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 PXDC1Q5TGL8 231 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 ZNF695Q8IW36 515 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 CMTM1Q8IZ96 169 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 CLEC18CQ8NCF0 446 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 OR1J1Q8NGS3 322 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 IL22RA2Q969J5 263 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 LRRC46Q96FV0 321 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 NARS2Q96I59 477 aaKnown RBP14.16□□□□□ -0.14
CCDC43-202ENST00000457422 KIRREL1Q96J84 757 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 CCL28Q9NRJ3 127 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 RCL1Q9Y2P8 373 aaKnown RBP14.16□□□□□ -0.14
CCDC43-202ENST00000457422 OR2W1Q9Y3N9 320 aa14.16□□□□□ -0.14
CCDC43-202ENST00000457422 PRRC2CQ9Y520 2896 aaKnown RBP14.16□□□□□ -0.14
CCDC43-202ENST00000457422 LOC105371267A0A1B0GV96 52 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 NKX2-6A6NCS4 301 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 TMEM210A6NLX4 147 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 H0Y980 276 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 HSD17B6O14756 317 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 ACAA1P09110 424 aaPredicted RBP14.15□□□□□ -0.14
CCDC43-202ENST00000457422 WNT2P09544 360 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 BLOC1S1P78537 153 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 PSG7Q13046 419 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 ZNF154Q13106 437 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 ATRAIDQ6UW56 229 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 OR10J5Q8NHC4 309 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 BSCL2Q96G97 398 aaPredicted RBP14.15□□□□□ -0.14
CCDC43-202ENST00000457422 GPHA2Q96T91 129 aa14.15□□□□□ -0.14
CCDC43-202ENST00000457422 ZNF891A8MT65 544 aaPredicted RBP14.14□□□□□ -0.15
CCDC43-202ENST00000457422 OR2H2O95918 312 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 HOXC12P31275 282 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 ZNF273Q14593 569 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 GNMTQ14749 295 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 CLEC9AQ6UXN8 241 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 WDR31Q8NA23 367 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 OR5D13Q8NGL4 314 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 LILRB1Q8NHL6 650 aaPredicted RBP14.14□□□□□ -0.15
CCDC43-202ENST00000457422 PARP11Q9NR21 331 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 SLC33A1O00400 549 aaPredicted RBP14.14□□□□□ -0.15
CCDC43-202ENST00000457422 ABCD4O14678 606 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 ATG12O94817 140 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 AGFG2O95081 481 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 VDAC1P21796 283 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 MPV17P39210 176 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 LPAR6P43657 344 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 ACSF3Q4G176 576 aaPredicted RBP14.14□□□□□ -0.15
CCDC43-202ENST00000457422 NMSQ5H8A3 153 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 C10orf91Q5T1B1 145 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 ZNF497Q6ZNH5 498 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms