RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ZNF367Q7RTV3 350 aa18.81■□□□□ 0.6
CBX3-204ENST00000456948 SVOPQ8N4V2 548 aa18.81■□□□□ 0.6
CBX3-204ENST00000456948 YTHDF1Q9BYJ9 559 aaKnown RBP18.81■□□□□ 0.6
CBX3-204ENST00000456948 TMEM30CPA0ZSE6 113 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A10PA6NDY2 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A18PA6NE21 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A16PA6NEW6 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A20PA6NIJ5 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A7PA6NKC0 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A22PA8MWA6 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A12PA8MX19 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A5PA8MXJ8 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A23PA8MXZ1 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 DENRO43583 198 aaKnown RBP18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A15PP0C7V4 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A13PP0C7W8 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A14PP0C7W9 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM90A24PP0C7X0 464 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 FAM189A2Q15884 450 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 SSX2Q16385 188 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 PRAMEF5Q5TYX0 476 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 C17orf50Q8WW18 174 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 SELENOIQ9C0D9 397 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 PPIL3Q9H2H8 161 aaKnown RBP18.8■□□□□ 0.6
CBX3-204ENST00000456948 RAB9BQ9NP90 201 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 ACOT13Q9NPJ3 140 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 PITPNC1Q9UKF7 332 aa18.8■□□□□ 0.6
CBX3-204ENST00000456948 CLPSL1A2RUU4 121 aa18.79■□□□□ 0.6
CBX3-204ENST00000456948 VGLL3A8MV65 326 aa18.79■□□□□ 0.6
CBX3-204ENST00000456948 UCHL1P09936 223 aa18.79■□□□□ 0.6
CBX3-204ENST00000456948 MDKP21741 143 aaPredicted RBP18.79■□□□□ 0.6
CBX3-204ENST00000456948 CEACAM3P40198 252 aa18.79■□□□□ 0.6
CBX3-204ENST00000456948 MAP2K4P45985 399 aa18.79■□□□□ 0.6
CBX3-204ENST00000456948 RSBN1Q5VWQ0 802 aaPredicted RBP18.79■□□□□ 0.6
CBX3-204ENST00000456948 LHFPL4Q7Z7J7 247 aa18.79■□□□□ 0.6
CBX3-204ENST00000456948 SGMS2Q8NHU3 365 aa18.79■□□□□ 0.6
CBX3-204ENST00000456948 SC5DO75845 299 aa18.78■□□□□ 0.6
CBX3-204ENST00000456948 MGMTP16455 207 aa18.78■□□□□ 0.6
CBX3-204ENST00000456948 NFYBP25208 207 aa18.78■□□□□ 0.6
CBX3-204ENST00000456948 PSMD7P51665 324 aa18.78■□□□□ 0.6
CBX3-204ENST00000456948 INSL4Q14641 139 aa18.78■□□□□ 0.6
CBX3-204ENST00000456948 OLFML2AQ68BL7 652 aa18.78■□□□□ 0.6
CBX3-204ENST00000456948 OR10A7Q8NGE5 316 aa18.78■□□□□ 0.6
CBX3-204ENST00000456948 AJUBAQ96IF1 538 aa18.78■□□□□ 0.6
CBX3-204ENST00000456948 CALYQ9NYX4 217 aa18.78■□□□□ 0.6
CBX3-204ENST00000456948 DPM3Q9P2X0 92 aa18.78■□□□□ 0.6
CBX3-204ENST00000456948 RRP15Q9Y3B9 282 aaKnown RBP18.78■□□□□ 0.6
CBX3-204ENST00000456948 A0A1W2PP11 408 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 LEUTXA8MZ59 168 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 CA11O75493 328 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 GLAP06280 429 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 CD34P28906 385 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 GABRA5P31644 462 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 LY6EQ16553 131 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 FAM27D1Q5T7N8 215 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 SLC16A12Q6ZSM3 486 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 LRRTM1Q86UE6 522 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 BANF2Q9H503 90 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 IDI2-AS1Q9NZ38 188 aa18.77■□□□□ 0.6
CBX3-204ENST00000456948 MMP23AO75900 390 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 IL1AP01583 271 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 FUT3P21217 361 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 HTR2CP28335 458 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 BRS3P32247 399 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 RPS25P62851 125 aaKnown RBP18.76■□□□□ 0.59
CBX3-204ENST00000456948 C17orf58Q2M2W7 97 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 RAB12Q6IQ22 244 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 LYPD6Q86Y78 171 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 OR6M1Q8NGM8 313 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 OR13A1Q8NGR1 328 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 OR9G1Q8NH87 305 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 KCNG3Q8TAE7 436 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 PLPPR1Q8TBJ4 325 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 MRGPRDQ8TDS7 321 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 LINC00574Q9H8X3 128 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 AMMECR1Q9Y4X0 333 aaPredicted RBP18.76■□□□□ 0.59
CBX3-204ENST00000456948 RNF114Q9Y508 228 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 HILPDAQ9Y5L2 63 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 PEX16Q9Y5Y5 336 aa18.76■□□□□ 0.59
CBX3-204ENST00000456948 A0A087X0M5 115 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 A0A1B0GX30 115 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 F2RL2O00254 374 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 DYNLT3P51808 116 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 PLA1AQ53H76 456 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 C1orf100Q5SVJ3 147 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 CCDC144NLQ6NUI1 221 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 OR4C13Q8NGP0 309 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 NPFFR1Q9GZQ6 430 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 PLGRKTQ9HBL7 147 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 ETAA1Q9NY74 926 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 RCC2Q9P258 522 aaKnown RBP18.75■□□□□ 0.59
CBX3-204ENST00000456948 LRRC42Q9Y546 428 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 TENM1Q9UKZ4 2725 aa18.75■□□□□ 0.59
CBX3-204ENST00000456948 AIPO00170 330 aa18.74■□□□□ 0.59
CBX3-204ENST00000456948 TSPAN9O75954 239 aa18.74■□□□□ 0.59
CBX3-204ENST00000456948 BPNT1O95861 308 aa18.74■□□□□ 0.59
CBX3-204ENST00000456948 MPIG6BO95866 241 aa18.74■□□□□ 0.59
CBX3-204ENST00000456948 CGB3P0DN86 165 aa18.74■□□□□ 0.59
CBX3-204ENST00000456948 CGB7P0DN87 165 aa18.74■□□□□ 0.59
CBX3-204ENST00000456948 RELBQ01201 579 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms