RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 FAM221AA4D161 298 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 DPRXA6NFQ7 191 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 KLF4O43474 513 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 GALR2O43603 387 aaPredicted RBP4.4□□□□□ -1.7
PCDH9-203ENST00000456367 SLC25A17O43808 307 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 NDUFS6O75380 124 aaKnown RBP4.4□□□□□ -1.7
PCDH9-203ENST00000456367 CA2P00918 260 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 SCGB1C2P0DMR2 95 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 CTLA4P16410 223 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 TNFSF10P50591 281 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 EDDM3BP56851 147 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 AESQ08117 197 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 DMWDQ09019 674 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 Q56UQ5 140 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 OR52L2PQ8NGH6 319 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 OR1F12Q8NHA8 337 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 ADAT3Q96EY9 351 aaPredicted RBP4.4□□□□□ -1.7
PCDH9-203ENST00000456367 ALG14Q96F25 216 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 TMEM222Q9H0R3 208 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 MED29Q9NX70 200 aa4.4□□□□□ -1.7
PCDH9-203ENST00000456367 MRPS18BQ9Y676 258 aaKnown RBP4.4□□□□□ -1.7
PCDH9-203ENST00000456367 IGSF23A1L1A6 192 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A10PA6NDY2 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A18PA6NE21 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A16PA6NEW6 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A20PA6NIJ5 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A8PA6NJQ4 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A7PA6NKC0 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A22PA8MWA6 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A12PA8MX19 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A5PA8MXJ8 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A23PA8MXZ1 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 H0Y980 276 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 K7ESM1 405 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 HS3ST1O14792 307 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 SRSF10O75494 262 aaKnown RBP4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FCGR3AP08637 254 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A15PP0C7V4 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A13PP0C7W8 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A14PP0C7W9 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FAM90A24PP0C7X0 464 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 LINC00869P0C866 280 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 ARL16Q0P5N6 197 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 GABRA6Q16445 453 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 DCAF10Q5QP82 559 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 BIVMQ86UB2 503 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 OR5A2Q8NGI9 324 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 OR11L1Q8NGX0 322 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 ORAOV1Q8WV07 137 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 KCNE4Q8WWG9 221 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 C5orf66Q9H5L9 145 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 SDF2L1Q9HCN8 221 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 TMEM38BQ9NVV0 291 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 H3BMH7 237 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 M0R296 226 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 S1PR2O95136 353 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 HLA-DRB1P01911 266 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 SOD3P08294 240 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 SSR4P51571 173 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 MRPS21P82921 87 aaKnown RBP4.4□□□□□ -1.71
PCDH9-203ENST00000456367 COL10A1Q03692 680 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 TBC1D28Q2M2D7 210 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 FBLN7Q53RD9 439 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 PYY3Q5JQD4 70 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 BCL2L2Q92843 193 aaPredicted RBP4.4□□□□□ -1.71
PCDH9-203ENST00000456367 APOBEC3DQ96AK3 386 aaPredicted RBP4.4□□□□□ -1.71
PCDH9-203ENST00000456367 NUDT11Q96G61 164 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 RARRES2Q99969 163 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 SPANXA1Q9NS26 97 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 TMEM106BQ9NUM4 274 aa4.4□□□□□ -1.71
PCDH9-203ENST00000456367 ERRFI1Q9UJM3 462 aaPredicted RBP4.4□□□□□ -1.71
PCDH9-203ENST00000456367 A0A1B0GX78 115 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 AMY1AP04745 511 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 PF4V1P10720 104 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 GNG3P63215 75 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 KRTCAP3Q53RY4 240 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 LY6G6FQ5SQ64 297 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 D2HGDHQ8N465 521 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 NUDT10Q8NFP7 164 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 OR10AC1Q8NH08 325 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 OR4X1Q8NH49 305 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 ASB10Q8WXI3 467 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 RDH5Q92781 318 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 MISP3Q96FF7 219 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 NRSN2Q9GZP1 204 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 SERTM2A0A1B0GWG4 89 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 SLC17A3O00476 420 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 C17orf78Q8N4C9 275 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 OR4C3Q8NH37 302 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 KISS1RQ969F8 398 aaPredicted RBP4.39□□□□□ -1.71
PCDH9-203ENST00000456367 TPPP3Q9BW30 176 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 COMMD5Q9GZQ3 224 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 ZNF665Q9H7R5 613 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 ZNF430Q9H8G1 570 aaPredicted RBP4.39□□□□□ -1.71
PCDH9-203ENST00000456367 FBLN5Q9UBX5 448 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 SLX4Q8IY92 1834 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 NUP214P35658 2090 aaPredicted RBP4.39□□□□□ -1.71
PCDH9-203ENST00000456367 ITGB4P16144 1822 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 OR5B21A6NL26 309 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 RAB29O14966 203 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms