RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 ADAM20O43506 726 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 NAPSAO96009 420 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 TK1P04183 234 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 PAX1P15863 534 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 RCC1P18754 421 aaPredicted RBP9.12□□□□□ -0.95
SCN9A-205ENST00000454569 PNLIPRP3Q17RR3 467 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 FAM53AQ6NSI3 398 aaPredicted RBP9.12□□□□□ -0.95
SCN9A-205ENST00000454569 FIP1L1Q6UN15 594 aaKnown RBP9.12□□□□□ -0.95
SCN9A-205ENST00000454569 ZNF841Q6ZN19 808 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 UBALD1Q8TB05 177 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 NEK7Q8TDX7 302 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 CCDC107Q8WV48 283 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 SNAPC3Q92966 411 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 SNX22Q96L94 193 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 CMSS1Q9BQ75 279 aaKnown RBP9.12□□□□□ -0.95
SCN9A-205ENST00000454569 ST6GALNAC5Q9BVH7 336 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 BPESC1Q9GZL8 116 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 C11orf54Q9H0W9 315 aaPredicted RBP9.12□□□□□ -0.95
SCN9A-205ENST00000454569 ZNF665Q9H7R5 613 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 SEBOXQ9HB31 216 aaPredicted RBP9.12□□□□□ -0.95
SCN9A-205ENST00000454569 MTFP1Q9UDX5 166 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 BAHCC1Q9P281 2608 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 CCDC168Q8NDH2 2452 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 ZANQ9Y493 2812 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 SERPINE3A8MV23 424 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 ECDO95905 644 aaPredicted RBP9.11□□□□□ -0.95
SCN9A-205ENST00000454569 MT-ND4P03905 459 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 FCGR3AP08637 254 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 GDNFP39905 211 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 MDH2P40926 338 aaKnown RBP9.11□□□□□ -0.95
SCN9A-205ENST00000454569 GPR6P46095 362 aaPredicted RBP9.11□□□□□ -0.95
SCN9A-205ENST00000454569 TMEM33P57088 247 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 GNG2P59768 71 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 EDDM3AQ14507 147 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 GRK1Q15835 563 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 FAAP20Q6NZ36 180 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 ZNF497Q6ZNH5 498 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 GDPD3Q7L5L3 318 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 NRARPQ7Z6K4 114 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 TMEM185AQ8NFB2 350 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 OR4D10Q8NGI6 311 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 ENKURQ8TC29 256 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 GLS2Q9UI32 602 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 KIF25Q9UIL4 384 aa9.11□□□□□ -0.95
SCN9A-205ENST00000454569 CELSR1Q9NYQ6 3014 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 IGHV4-30-2A0A087WSY4 118 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 CENPXA8MT69 81 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 DVL1O14640 695 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 LPLP06858 475 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 WNT2P09544 360 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 GSTT2BP0CG30 244 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 SPNP16150 400 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 ATF4P18848 351 aaPredicted RBP9.1□□□□□ -0.95
SCN9A-205ENST00000454569 GIFP27352 417 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 IL2RGP31785 369 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 RFX2P48378 723 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 AP3S2P59780 193 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 ERVFRD-1P60508 538 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 IL13RA1P78552 427 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 CCBE1Q6UXH8 406 aaPredicted RBP9.1□□□□□ -0.95
SCN9A-205ENST00000454569 TCF23Q7RTU1 214 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 GAPTQ8N292 157 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 ZNF561Q8N587 486 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 C10orf105Q8TEF2 133 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 RAB1CQ92928 201 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 LURAP1Q96LR2 239 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 SPACA1Q9HBV2 294 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 MYOZ1Q9NP98 299 aaPredicted RBP9.1□□□□□ -0.95
SCN9A-205ENST00000454569 KAAG1Q9UBP8 84 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 ANAPC10Q9UM13 185 aa9.1□□□□□ -0.95
SCN9A-205ENST00000454569 VWC2LB2RUY7 222 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 SULT1C2O00338 296 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 CA11O75493 328 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 RBBP9O75884 186 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 FSTL3O95633 263 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 GHRHP01286 108 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 GLAP06280 429 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 HLA-DMAP28067 261 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 PDLIM4P50479 330 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 ACTBP60709 375 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 ACTG1P63261 375 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 KLF9Q13886 244 aaPredicted RBP9.09□□□□□ -0.95
SCN9A-205ENST00000454569 DEFB113Q30KQ7 82 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 KRBOX4Q5JUW0 171 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 UTF1Q5T230 341 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 SHEQ5VZ18 495 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 ZNF880Q6PDB4 577 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 HOGA1Q86XE5 327 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 KRTAP1-3Q8IUG1 177 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 OR13A1Q8NGR1 328 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 C7orf50Q9BRJ6 194 aaKnown RBP9.09□□□□□ -0.95
SCN9A-205ENST00000454569 SCPEP1Q9HB40 452 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 Q9N2K0 584 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 C19orf12Q9NSK7 152 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 SVEP1Q4LDE5 3571 aa9.09□□□□□ -0.95
SCN9A-205ENST00000454569 IGKV1-6A0A0C4DH72 117 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 FAM240BA0A1B0GVZ2 78 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 ANKRD20A5PA0PJZ0 165 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 ADARB2-AS1A8MUL3 147 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 M0QYG6 137 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms