RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 ABRACLQ9P1F3 81 aa12.87□□□□□ -0.35
RBM39-219ENST00000453310 UBE2J1Q9Y385 318 aaPredicted RBP12.87□□□□□ -0.35
RBM39-219ENST00000453310 TRAV40A0A0B4J280 105 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 METTL21EPA6NDL7 271 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 CRLF1O75462 422 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 GLP1RP43220 463 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 DLX1P56177 255 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 TMEM50BP56557 158 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 SPCS2Q15005 226 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 MOGAT2Q3SYC2 334 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 KLF17Q5JT82 389 aaPredicted RBP12.86□□□□□ -0.35
RBM39-219ENST00000453310 CORO2AQ92828 525 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 ISOC1Q96CN7 298 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 ARHGAP5-AS1Q96IT6 56 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 ATG5Q9H1Y0 275 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 METTL8Q9H825 291 aaKnown RBP12.86□□□□□ -0.35
RBM39-219ENST00000453310 PLEKHJ1Q9NW61 149 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 HSF4Q9ULV5 492 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 CEPT1Q9Y6K0 416 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 KIAA2026Q5HYC2 2103 aa12.86□□□□□ -0.35
RBM39-219ENST00000453310 hCG_1809904A0A1W2PP81 198 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 A0A1W2PPE2 198 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 A0A1W2PR64 198 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 A0A1W2PRV1 198 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 C17orf98A8MV24 154 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 H3BMQ9 156 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 RAB27BO00194 218 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 CA11O75493 328 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 RBP4P02753 201 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 MT-ND4P03905 459 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 IGHV4-38-2P0DP08 117 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 SRD5A1P18405 259 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 PRTN3P24158 256 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 RORCP51449 518 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 PRB3Q04118 309 aaPredicted RBP12.85□□□□□ -0.35
RBM39-219ENST00000453310 PLAC9Q5JTB6 97 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 Q6ZTK2 550 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 GAPTQ8N292 157 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 C11orf42Q8N5U0 333 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 OR13A1Q8NGR1 328 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 OR10R2Q8NGX6 335 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 LHX4Q969G2 390 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 KCTD12Q96CX2 325 aaKnown RBP12.85□□□□□ -0.35
RBM39-219ENST00000453310 SLC25A38Q96DW6 304 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 FAAP24Q9BTP7 215 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 GAL3ST2Q9H3Q3 398 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 UNKLQ9H9P5 680 aaKnown RBP12.85□□□□□ -0.35
RBM39-219ENST00000453310 RHBDL2Q9NX52 303 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 TAS2R3Q9NYW6 316 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 SPATA2Q9UM82 520 aa12.85□□□□□ -0.35
RBM39-219ENST00000453310 IGHV3OR16-10A0A075B7F0 116 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 TRAV39A0A0B4J263 110 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 CCDC160A6NGH7 325 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 CLPXO76031 633 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 HOXB4P17483 251 aaPredicted RBP12.84□□□□□ -0.35
RBM39-219ENST00000453310 ERVFRD-1P60508 538 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 KLRD1Q13241 179 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 GPR157Q5UAW9 335 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 ZNF565Q8N9K5 539 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 MRGPRDQ8TDS7 321 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 CCDC107Q8WV48 283 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 TNFRSF14Q92956 283 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 RAB3CQ96E17 227 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 PECRQ9BY49 303 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 RBM38Q9H0Z9 239 aaKnown RBP12.84□□□□□ -0.35
RBM39-219ENST00000453310 NUP50Q9UKX7 468 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 NAV3Q8IVL0 2385 aa12.84□□□□□ -0.35
RBM39-219ENST00000453310 CENPVL3A0A0U1RRI6 287 aa12.83□□□□□ -0.36
RBM39-219ENST00000453310 ZNF729A6NN14 1252 aaPredicted RBP12.83□□□□□ -0.36
RBM39-219ENST00000453310 SCGNO76038 276 aa12.83□□□□□ -0.36
RBM39-219ENST00000453310 IGHV1-8P0DP01 117 aa12.83□□□□□ -0.36
RBM39-219ENST00000453310 C17orf58Q2M2W7 97 aa12.83□□□□□ -0.36
RBM39-219ENST00000453310 PRAMEF5Q5TYX0 476 aa12.83□□□□□ -0.36
RBM39-219ENST00000453310 NCR3LG1Q68D85 454 aa12.83□□□□□ -0.36
RBM39-219ENST00000453310 ZNF782Q6ZMW2 699 aaPredicted RBP12.83□□□□□ -0.36
RBM39-219ENST00000453310 OR4K15Q8NH41 348 aa12.83□□□□□ -0.36
RBM39-219ENST00000453310 MRPL30Q8TCC3 161 aaKnown RBP12.83□□□□□ -0.36
RBM39-219ENST00000453310 CALYQ9NYX4 217 aa12.83□□□□□ -0.36
RBM39-219ENST00000453310 AK3Q9UIJ7 227 aa12.83□□□□□ -0.36
RBM39-219ENST00000453310 TRAPPC2LQ9UL33 140 aa12.83□□□□□ -0.36
RBM39-219ENST00000453310 ZFHX3Q15911 3703 aa12.83□□□□□ -0.36
RBM39-219ENST00000453310 KBTBD11-OT1A0A1B0GTJ5 212 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 RNASEK-C17orf49H0YIS7 233 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 MFNGO00587 321 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 FAM157CP0CG43 387 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 CGB3P0DN86 165 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 CGB7P0DN87 165 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 HIST1H1DP16402 221 aaKnown RBP12.82□□□□□ -0.36
RBM39-219ENST00000453310 GNB3P16520 340 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 ZNF182P17025 639 aaPredicted RBP12.82□□□□□ -0.36
RBM39-219ENST00000453310 EPHA1P21709 976 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 CDK2P24941 298 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 SSTR5P35346 364 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 DYNC1I2Q13409 638 aaKnown RBP12.82□□□□□ -0.36
RBM39-219ENST00000453310 UBE2NLQ5JXB2 153 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 HEPN1Q6WQI6 88 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 PDZD9Q8IXQ8 264 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 ACOT12Q8WYK0 555 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 AP3S1Q92572 193 aa12.82□□□□□ -0.36
RBM39-219ENST00000453310 KCNK7Q9Y2U2 307 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms