RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 SLC22A6Q4U2R8 563 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 PYDC2Q56P42 97 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 NHLRC3Q5JS37 347 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 AWAT2Q6E213 333 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 LRRTM1Q86UE6 522 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 TCTE3Q8IZS6 198 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 Q8N7P7 452 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 OR4S1Q8NGB4 309 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 OR10K1Q8NGX5 313 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 C15orf40Q8WUR7 153 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 C22orf15Q8WYQ4 148 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 TMEM158Q8WZ71 300 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 ZDHHC16Q969W1 377 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 CREB3L1Q96BA8 519 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 CHST6Q9GZX3 395 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 MIXL1Q9H2W2 232 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 SLA2Q9H6Q3 261 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 UNKLQ9H9P5 680 aaKnown RBP7.3□□□□□ -1.24
COL8A1-203ENST00000452013 COPZ2Q9P299 210 aa7.3□□□□□ -1.24
COL8A1-203ENST00000452013 TRAV1-2A0A0B4J238 106 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 SLC33A1O00400 549 aaPredicted RBP7.29□□□□□ -1.24
COL8A1-203ENST00000452013 PDCD5O14737 125 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 OR7C1O76099 320 aaPredicted RBP7.29□□□□□ -1.24
COL8A1-203ENST00000452013 CSN2P05814 226 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 ZNF728P0DKX0 622 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 CD37P11049 281 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 OR3A1P47881 315 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 RFX2P48378 723 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 UBE2E1P51965 193 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 RAG2P55895 527 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 P2RX3P56373 397 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 ERVFRD-1P60508 538 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 BAK1Q16611 211 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 MPV17LQ2QL34 196 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 PAN3Q58A45 887 aaKnown RBP7.29□□□□□ -1.24
COL8A1-203ENST00000452013 KRBOX4Q5JUW0 171 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 C1orf100Q5SVJ3 147 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 FAM27D1Q5T7N8 215 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 PYHIN1Q6K0P9 492 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 LYPD6Q86Y78 171 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 BCL6BQ8N143 479 aaPredicted RBP7.29□□□□□ -1.24
COL8A1-203ENST00000452013 Q8N402 240 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 ZNF565Q8N9K5 539 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 OR4D6Q8NGJ1 314 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 DEDD2Q8WXF8 326 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 CORO2AQ92828 525 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 ZNF714Q96N38 554 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 NKX3-1Q99801 234 aaPredicted RBP7.29□□□□□ -1.24
COL8A1-203ENST00000452013 SLC6A7Q99884 636 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 GON7Q9BXV9 100 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 CST11Q9H112 138 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 PPIL3Q9H2H8 161 aaKnown RBP7.29□□□□□ -1.24
COL8A1-203ENST00000452013 NCOR1P1Q9H4R4 102 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 IFT22Q9H7X7 185 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 SPACA1Q9HBV2 294 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 DIABLOQ9NR28 239 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 SIRT7Q9NRC8 400 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 ABRACLQ9P1F3 81 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 UBE2J1Q9Y385 318 aaPredicted RBP7.29□□□□□ -1.24
COL8A1-203ENST00000452013 FAM96BQ9Y3D0 163 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 LINC00312Q9Y6C7 94 aa7.29□□□□□ -1.24
COL8A1-203ENST00000452013 CR1P17927 2039 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 TRGV10A0A0A0MS01 117 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 TRAV24A0A0B4J272 114 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A10PA6NDY2 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A18PA6NE21 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A16PA6NEW6 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A20PA6NIJ5 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A8PA6NJQ4 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A7PA6NKC0 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 C17orf98A8MV24 154 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A22PA8MWA6 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A12PA8MX19 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A5PA8MXJ8 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A23PA8MXZ1 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 MCRIP1C9JLW8 97 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 TRIM77I1YAP6 450 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 GEMIN2O14893 280 aaKnown RBP7.28□□□□□ -1.24
COL8A1-203ENST00000452013 CRTAPO75718 401 aaPredicted RBP7.28□□□□□ -1.24
COL8A1-203ENST00000452013 BPNT1O95861 308 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 RBP4P02753 201 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 GLAP06280 429 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A15PP0C7V4 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A13PP0C7W8 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A14PP0C7W9 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 FAM90A24PP0C7X0 464 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 SPNP16150 400 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 CCL3L1P16619 93 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 HTR2CP28335 458 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 RBM11P57052 281 aaKnown RBP7.28□□□□□ -1.24
COL8A1-203ENST00000452013 HILS1P60008 231 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 MXD1Q05195 221 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 AESQ08117 197 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 BAMBIQ13145 260 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 RBM39Q14498 530 aaKnown RBP7.28□□□□□ -1.24
COL8A1-203ENST00000452013 TAF9Q16594 264 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 PIGYQ3MUY2 71 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 ATAD3CQ5T2N8 411 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 CNIH2Q6PI25 160 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 BRD3OSQ6XYD6 125 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms