RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ZNF488Q96MN9 340 aa17.72■□□□□ 0.43
C9orf3-208ENST00000451893 VPREB3Q9UKI3 123 aa17.72■□□□□ 0.43
C9orf3-208ENST00000451893 A0A0A6YYH2 397 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 A6NJ64 397 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 TIMM23O14925 209 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 SYNGR1O43759 233 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 UPK1BO75841 260 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 SCGNO76038 276 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 EIF4EP06730 217 aaKnown RBP17.71■□□□□ 0.43
C9orf3-208ENST00000451893 MNDAP41218 407 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 POU3F4P49335 361 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 CLDN12P56749 244 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 RELBQ01201 579 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 KISS1Q15726 138 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 PNKDQ8N490 385 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 OR5R1Q8NH85 324 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 SDSLQ96GA7 329 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 SRRQ9GZT4 340 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 DIABLOQ9NR28 239 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 RHBDL2Q9NX52 303 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 RAB22AQ9UL26 194 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 MAB21L2Q9Y586 359 aa17.71■□□□□ 0.43
C9orf3-208ENST00000451893 A0A0B4J203 849 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 M0QZ24 198 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 PRDX2P32119 198 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 RBP2P50120 134 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 ATP1B3P54709 279 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 RPL31P62899 125 aaKnown RBP17.7■□□□□ 0.42
C9orf3-208ENST00000451893 IL18Q14116 193 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 P2RY14Q15391 338 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 OR2W3Q7Z3T1 314 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 ANGPTL5Q86XS5 388 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 GPER1Q99527 375 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 FAM234AQ9H0X4 552 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 ZNF222Q9UK12 451 aa17.7■□□□□ 0.42
C9orf3-208ENST00000451893 LDLRAD4O15165 306 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 PGA5P0DJD9 388 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 CEBPDP49716 269 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-208ENST00000451893 LGALS4P56470 323 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 SRSF4Q08170 494 aaKnown RBP17.69■□□□□ 0.42
C9orf3-208ENST00000451893 ZNF79Q15937 498 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 PYDC2Q56P42 97 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 ASCC1Q8N9N2 400 aaKnown RBP17.69■□□□□ 0.42
C9orf3-208ENST00000451893 OR4M1Q8NGD0 313 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 OR4D6Q8NGJ1 314 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 KCNG3Q8TAE7 436 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 PHF21AQ96BD5 680 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 SLC25A38Q96DW6 304 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 BORCS8Q96FH0 119 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 HEXA-AS1Q9H8Q6 139 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 PCDHB16Q9NRJ7 776 aa17.69■□□□□ 0.42
C9orf3-208ENST00000451893 PQLC2LA1A4F0 135 aa17.68■□□□□ 0.42
C9orf3-208ENST00000451893 METTL21EPA6NDL7 271 aa17.68■□□□□ 0.42
C9orf3-208ENST00000451893 CTDSPLO15194 276 aa17.68■□□□□ 0.42
C9orf3-208ENST00000451893 PTGFRP43088 359 aa17.68■□□□□ 0.42
C9orf3-208ENST00000451893 MTCP1P56278 107 aa17.68■□□□□ 0.42
C9orf3-208ENST00000451893 MRPS10P82664 201 aaKnown RBP17.68■□□□□ 0.42
C9orf3-208ENST00000451893 TAF9Q16594 264 aa17.68■□□□□ 0.42
C9orf3-208ENST00000451893 RAB12Q6IQ22 244 aa17.68■□□□□ 0.42
C9orf3-208ENST00000451893 C19orf12Q9NSK7 152 aa17.68■□□□□ 0.42
C9orf3-208ENST00000451893 MRPS28Q9Y2Q9 187 aaKnown RBP17.68■□□□□ 0.42
C9orf3-208ENST00000451893 TMEM272A0A1B0GTI8 110 aa17.67■□□□□ 0.42
C9orf3-208ENST00000451893 XRCC3O43542 346 aa17.67■□□□□ 0.42
C9orf3-208ENST00000451893 CYB5AP00167 134 aa17.67■□□□□ 0.42
C9orf3-208ENST00000451893 GPR176Q14439 515 aa17.67■□□□□ 0.42
C9orf3-208ENST00000451893 HACD4Q5VWC8 232 aa17.67■□□□□ 0.42
C9orf3-208ENST00000451893 AWAT2Q6E213 333 aa17.67■□□□□ 0.42
C9orf3-208ENST00000451893 CD177Q8N6Q3 437 aa17.67■□□□□ 0.42
C9orf3-208ENST00000451893 LINC01006Q8NI28 216 aa17.67■□□□□ 0.42
C9orf3-208ENST00000451893 TNFRSF14Q92956 283 aa17.67■□□□□ 0.42
C9orf3-208ENST00000451893 S100A13Q99584 98 aa17.67■□□□□ 0.42
C9orf3-208ENST00000451893 PPA2Q9H2U2 334 aa17.67■□□□□ 0.42
C9orf3-208ENST00000451893 H3BUX3 64 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 ZNF780AO75290 641 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-208ENST00000451893 COX7A1P24310 79 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 EDDM3BP56851 147 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 DEFA1P59665 94 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 DEFA3P59666 94 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 QRFPP83859 136 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 MIDNQ504T8 468 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 GLIPR1L1Q6UWM5 242 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 ASCL4Q6XD76 172 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 MKXQ8IYA7 352 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 OR8H2Q8N162 312 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 Q8N402 240 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 ZSCAN4Q8NAM6 433 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-208ENST00000451893 SDHCQ99643 169 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-208ENST00000451893 SSX3Q99909 188 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 NRIP2Q9BQI9 281 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 PKIBQ9C010 78 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 CST11Q9H112 138 aa17.66■□□□□ 0.42
C9orf3-208ENST00000451893 TMEM14DPA8MWL7 114 aa17.65■□□□□ 0.42
C9orf3-208ENST00000451893 NOS1APO75052 506 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-208ENST00000451893 TK1P04183 234 aa17.65■□□□□ 0.42
C9orf3-208ENST00000451893 CHRM2P08172 466 aa17.65■□□□□ 0.42
C9orf3-208ENST00000451893 ERVFRD-1P60508 538 aa17.65■□□□□ 0.42
C9orf3-208ENST00000451893 SCN1BQ07699 218 aa17.65■□□□□ 0.42
C9orf3-208ENST00000451893 IL24Q13007 206 aa17.65■□□□□ 0.42
C9orf3-208ENST00000451893 LY6EQ16553 131 aa17.65■□□□□ 0.42
C9orf3-208ENST00000451893 Q6ZSV7 163 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms