RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 CHCHD3Q9NX63 227 aaKnown RBP6.96□□□□□ -1.3
RFX3-209ENST00000451859 TAS2R3Q9NYW6 316 aa6.96□□□□□ -1.3
RFX3-209ENST00000451859 OR6C3Q9NZP0 311 aa6.96□□□□□ -1.3
RFX3-209ENST00000451859 DPM3Q9P2X0 92 aa6.96□□□□□ -1.3
RFX3-209ENST00000451859 ZNF281Q9Y2X9 895 aa6.96□□□□□ -1.3
RFX3-209ENST00000451859 EXOSC1Q9Y3B2 195 aaKnown RBP6.96□□□□□ -1.3
RFX3-209ENST00000451859 A0A1W2PP11 408 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 A0A1W2PPE3 182 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 A0A1W2PRX2 142 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 LEUTXA8MZ59 168 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 F8W735 103 aaPredicted RBP6.95□□□□□ -1.3
RFX3-209ENST00000451859 G3V4G9 280 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 XPNPEP2O43895 674 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 OR7C1O76099 320 aaPredicted RBP6.95□□□□□ -1.3
RFX3-209ENST00000451859 IGLV1-40P01703 118 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 CSTBP04080 98 aaKnown RBP6.95□□□□□ -1.3
RFX3-209ENST00000451859 CSN2P05814 226 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 GNAO1P09471 354 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 BDKRB2P30411 391 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 BRS3P32247 399 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 DYNLT3P51808 116 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 ARHGDIBP52566 201 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 PRRX1P54821 245 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 BDH1Q02338 343 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 ST3GAL4Q11206 333 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 MED21Q13503 144 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 IL13RA2Q14627 380 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 HLA-DRB5Q30154 266 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 SLC22A6Q4U2R8 563 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 ABCA11PQ4W5N1 156 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 C9orf152Q5JTZ5 239 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 ATAD3CQ5T2N8 411 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 TPTE2P1Q5T6R2 138 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 ELP2Q6IA86 826 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 ZNF529Q6P280 563 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 AHSA2Q719I0 299 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 RTN4RL2Q86UN3 420 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 HAVCR2Q8TDQ0 301 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 NEK7Q8TDX7 302 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 CORO2AQ92828 525 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 GHSRQ92847 366 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 TOMM40LQ969M1 308 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 KIRREL1Q96J84 757 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 ZNF184Q99676 751 aaPredicted RBP6.95□□□□□ -1.3
RFX3-209ENST00000451859 SLC25A33Q9BSK2 321 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 TMEM138Q9NPI0 162 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 BABAM2Q9NXR7 383 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 CALYQ9NYX4 217 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 ST3GAL6Q9Y274 331 aa6.95□□□□□ -1.3
RFX3-209ENST00000451859 TRAV8-7A0A075B6U6 113 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 KBTBD11-OT1A0A1B0GTJ5 212 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 BUB1B-PAK6H3BSN5 160 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 H3BUI4 141 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 GEMIN2O14893 280 aaKnown RBP6.94□□□□□ -1.3
RFX3-209ENST00000451859 OGG1O15527 345 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 IGLV1-47P01700 117 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 LPLP06858 475 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 C21orf33P30042 268 aaPredicted RBP6.94□□□□□ -1.3
RFX3-209ENST00000451859 SSTR5P35346 364 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 CEACAM3P40198 252 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 MNDAP41218 407 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 RBM11P57052 281 aaKnown RBP6.94□□□□□ -1.3
RFX3-209ENST00000451859 ADARB1P78563 741 aaKnown RBP6.94□□□□□ -1.3
RFX3-209ENST00000451859 RIPK1Q13546 671 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 HES1Q14469 280 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 KHDC1LQ5JSQ8 128 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 RSBN1Q5VWQ0 802 aaPredicted RBP6.94□□□□□ -1.3
RFX3-209ENST00000451859 C8orf59Q8N0T1 100 aaPredicted RBP6.94□□□□□ -1.3
RFX3-209ENST00000451859 OSR2Q8N2R0 312 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 STX19Q8N4C7 294 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 JAGN1Q8N5M9 183 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 PACRGLQ8N7B6 248 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 DTX3Q8N9I9 347 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 ZNF565Q8N9K5 539 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 SUMF2Q8NBJ7 301 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 BPIFB6Q8NFQ5 453 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 OR52N1Q8NH53 320 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 OR56B4Q8NH76 319 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 OR9G1Q8NH87 305 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 CCDC107Q8WV48 283 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 CFHR4Q92496 578 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 GGHQ92820 318 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 MUL1Q969V5 352 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 RPEQ96AT9 228 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 R3HDM4Q96D70 268 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 OR14A2Q96R54 314 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 CITED2Q99967 270 aaPredicted RBP6.94□□□□□ -1.3
RFX3-209ENST00000451859 DPCDQ9BVM2 203 aaPredicted RBP6.94□□□□□ -1.3
RFX3-209ENST00000451859 BARHL1Q9BZE3 327 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 METTL9Q9H1A3 318 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 MMP28Q9H239 520 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 IDI2-AS1Q9NZ38 188 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.94□□□□□ -1.3
RFX3-209ENST00000451859 CKLFQ9UBR5 152 aa6.94□□□□□ -1.3
RFX3-209ENST00000451859 IGHV3-43A0A0B4J1X8 118 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 TMEM30CPA0ZSE6 113 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 EFCAB10A6NFE3 127 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 FAM90A22PA8MWA6 464 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 J3QR06 171 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 MYL12BO14950 172 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms