RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 GABPB1Q06547 395 aaPredicted RBP7.78□□□□□ -1.16
USP54-207ENST00000451492 INSL4Q14641 139 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 HLA-DRB5Q30154 266 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 RSBN1Q5VWQ0 802 aaPredicted RBP7.78□□□□□ -1.16
USP54-207ENST00000451492 AWAT2Q6E213 333 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 GLIPR1L1Q6UWM5 242 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 Q6ZS46 218 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 RTN4RL2Q86UN3 420 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 ZNF485Q8NCK3 441 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 CCDC107Q8WV48 283 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 CAPSLQ8WWF8 208 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 SGCDQ92629 289 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 TOMM40LQ969M1 308 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 TMED9Q9BVK6 235 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 BARHL1Q9BZE3 327 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 PRSS22Q9GZN4 317 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 BANF2Q9H503 90 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 DCLRE1BQ9H816 532 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 IDI2-AS1Q9NZ38 188 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 DPM3Q9P2X0 92 aa7.78□□□□□ -1.16
USP54-207ENST00000451492 MRPS28Q9Y2Q9 187 aaKnown RBP7.78□□□□□ -1.16
USP54-207ENST00000451492 IGHV3-43A0A0B4J1X8 118 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 KBTBD11-OT1A0A1B0GTJ5 212 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 LEUTXA8MZ59 168 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 BUB1B-PAK6H3BSN5 160 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 FBXO24O75426 580 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 CRTAPO75718 401 aaPredicted RBP7.77□□□□□ -1.17
USP54-207ENST00000451492 IL1AP01583 271 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 IGLV1-47P01700 117 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 IGHV3-43DP0DP04 118 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 CD28P10747 220 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 FSTP19883 344 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 BRS3P32247 399 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 VHLP40337 213 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 ARHGDIBP52566 201 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 PRRX1P54821 245 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 BLCAPP62952 87 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 BDH1Q02338 343 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 MED22Q15528 200 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 C9orf152Q5JTZ5 239 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 TPTE2P1Q5T6R2 138 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 FAM27D1Q5T7N8 215 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 PRR18Q8N4B5 295 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 NANOGP1Q8N7R0 232 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 ZNF565Q8N9K5 539 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 NRG4Q8WWG1 115 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 TFAP2CQ92754 450 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 FAM46BQ96A09 425 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 CYYR1Q96J86 154 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 DERL3Q96Q80 235 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 SLC25A33Q9BSK2 321 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 MND1Q9BWT6 205 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 MMP28Q9H239 520 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 PAK1IP1Q9NWT1 392 aaPredicted RBP7.77□□□□□ -1.17
USP54-207ENST00000451492 IL36GQ9NZH8 169 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 ERGIC3Q9Y282 383 aa7.77□□□□□ -1.17
USP54-207ENST00000451492 TRBV5-7A0A0A0MS05 114 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 A0A1W2PRX2 142 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 TMEM30CPA0ZSE6 113 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 AIPO00170 330 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 CDK1P06493 297 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 GTF2F2P13984 249 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 CEACAM3P40198 252 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 DIAPH2-AS1Q14236 149 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 HES1Q14469 280 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 ABCA11PQ4W5N1 156 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 RBM48Q5RL73 367 aaKnown RBP7.76□□□□□ -1.17
USP54-207ENST00000451492 FAM53AQ6NSI3 398 aaPredicted RBP7.76□□□□□ -1.17
USP54-207ENST00000451492 ASCL4Q6XD76 172 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 LINC00596Q86U02 117 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 OR56B4Q8NH76 319 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 OR9G1Q8NH87 305 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 FBLIM1Q8WUP2 373 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 RPEQ96AT9 228 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 SELENOIQ9C0D9 397 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 CCDC90BQ9GZT6 254 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 KCNK15Q9H427 330 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 SERTAD4Q9NUC0 356 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 PLCXD1Q9NUJ7 323 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 FKBP14Q9NWM8 211 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 PSG11Q9UQ72 335 aa7.76□□□□□ -1.17
USP54-207ENST00000451492 AMMECR1Q9Y4X0 333 aaPredicted RBP7.76□□□□□ -1.17
USP54-207ENST00000451492 UBE2QL1A1L167 161 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 J3QR06 171 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 SDCBPO00560 298 aaPredicted RBP7.75□□□□□ -1.17
USP54-207ENST00000451492 PIN1P1O15428 100 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 ZNF780AO75290 641 aaPredicted RBP7.75□□□□□ -1.17
USP54-207ENST00000451492 LPLP06858 475 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 SNRNP70P08621 437 aaKnown RBP7.75□□□□□ -1.17
USP54-207ENST00000451492 HSMCR30P0CW71 290 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 MGMTP16455 207 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 MAPK3P27361 379 aaPredicted RBP7.75□□□□□ -1.17
USP54-207ENST00000451492 CD34P28906 385 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 MNDAP41218 407 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 REG1BP48304 166 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 KCNJ3P48549 501 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 DYNLT3P51808 116 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 GPR50Q13585 617 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 MPV17LQ2QL34 196 aa7.75□□□□□ -1.17
USP54-207ENST00000451492 NHLRC3Q5JS37 347 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms