RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TFF1P04155 84 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 PRTN3P24158 256 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 IL13RA2Q14627 380 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 NHLRC3Q5JS37 347 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 SPIN3Q5JUX0 258 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 RUSC1-AS1Q66K80 236 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 BTN2A1Q7KYR7 527 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 BATF2Q8N1L9 274 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 C3orf56Q8N813 242 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 OR4M1Q8NGD0 313 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 OR51T1Q8NGJ9 327 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM46BQ96A09 425 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 SELENOIQ9C0D9 397 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 BANF2Q9H503 90 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 ST3GAL6Q9Y274 331 aa14.06□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A10PA6NDY2 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A18PA6NE21 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A16PA6NEW6 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A20PA6NIJ5 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A8PA6NJQ4 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A7PA6NKC0 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A22PA8MWA6 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A12PA8MX19 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A5PA8MXJ8 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A23PA8MXZ1 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 SH2D1BO14796 132 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 LDLRAD4O15165 306 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 SCGNO76038 276 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 TOX4O94842 621 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 EIF4EP06730 217 aaKnown RBP14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A15PP0C7V4 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A13PP0C7W8 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A14PP0C7W9 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM90A24PP0C7X0 464 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 COMPP49747 757 aaPredicted RBP14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 EIF2B2P49770 351 aaKnown RBP14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 ARF6P62330 175 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 QRFPP83859 136 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 DEFB112Q30KQ8 113 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 OR10K2Q6IF99 312 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 PLET1Q6UQ28 207 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM216BQ8N7L0 139 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 TAF15Q92804 592 aaKnown RBP eCLIP14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 TBX15Q96SF7 602 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 C11orf54Q9H0W9 315 aaPredicted RBP14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 WDR13Q9H1Z4 485 aa14.05□□□□□ -0.16
PRPF40A-204ENST00000450303 FAM240BA0A1B0GVZ2 78 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 OR2AT4A6NND4 320 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 F8VVB4 439 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 F8VWA3 439 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 LYRM1O43325 122 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 CHRM2P08172 466 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 AMY2BP19961 511 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 SNU13P55769 128 aaKnown RBP14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 RBM11P57052 281 aaKnown RBP14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 RPS27AP62979 156 aaKnown RBP14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 IKZF1Q13422 519 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 UNC119Q13432 240 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 ZNF146Q15072 292 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 SLC9A3R2Q15599 337 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 MPV17LQ2QL34 196 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 GPR157Q5UAW9 335 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 RSBN1Q5VWQ0 802 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 C9orf139Q6ZV77 190 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 TMEM104Q8NE00 496 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 OR56B1Q8NGI3 324 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 OR5H6Q8NGV6 325 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 S100A16Q96FQ6 103 aaKnown RBP14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 TM2D1Q9BX74 207 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 ATG5Q9H1Y0 275 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 SEBOXQ9HB31 216 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 TNFRSF19Q9NS68 423 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 KAAG1Q9UBP8 84 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 OR14J1Q9UGF5 321 aa14.04□□□□□ -0.16
PRPF40A-204ENST00000450303 A0A1W2PP11 408 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 NKX6-3A6NJ46 265 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 TPPPO94811 219 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 LIPFP07098 398 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 TRAPPC2P0DI81 140 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 TRAPPC2BP0DI82 140 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 SELLP14151 372 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 MMP9P14780 707 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 GABRA2P47869 451 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 RFX2P48378 723 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 AWAT1Q58HT5 328 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 RAB12Q6IQ22 244 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 ZDHHC16Q969W1 377 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 Q96M66 194 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 C7orf50Q9BRJ6 194 aaKnown RBP14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 THAP7Q9BT49 309 aaPredicted RBP14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 SIRPDQ9H106 197 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 DNTTIP1Q9H147 329 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 KCNK15Q9H427 330 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 SPACA1Q9HBV2 294 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 DIABLOQ9NR28 239 aa14.03□□□□□ -0.16
PRPF40A-204ENST00000450303 A0A0A6YYH2 397 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 CENPVL3A0A0U1RRI6 287 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 A6NJ64 397 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 RFPL4AA6NLU0 287 aa14.02□□□□□ -0.17
PRPF40A-204ENST00000450303 RFPL4AL1F8VTS6 287 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms