RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 GEMIN2O14893 280 aaKnown RBP12.49□□□□□ -0.41
LIMS1-210ENST00000449684 GPX5O75715 221 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 CSF1P09603 554 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 FSTP19883 344 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 CD34P28906 385 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 GDNFP39905 211 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 RPS11P62280 158 aaKnown RBP eCLIP12.49□□□□□ -0.41
LIMS1-210ENST00000449684 DOC2BQ14184 412 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 C17orf58Q2M2W7 97 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 MPV17LQ2QL34 196 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 HLA-DRB5Q30154 266 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 NHLRC3Q5JS37 347 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 AWAT2Q6E213 333 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 LAIR2Q6ISS4 152 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 CCDC144NLQ6NUI1 221 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 GLIPR1L1Q6UWM5 242 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 RFESDQ8TAC1 157 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 PLPPR1Q8TBJ4 325 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 KIRREL1Q96J84 757 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 VCX3BQ9H321 246 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 IDI2-AS1Q9NZ38 188 aa12.49□□□□□ -0.41
LIMS1-210ENST00000449684 AMMECR1Q9Y4X0 333 aaPredicted RBP12.49□□□□□ -0.41
LIMS1-210ENST00000449684 TRBV5-7A0A0A0MS05 114 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 TMEM30CPA0ZSE6 113 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 BUB1B-PAK6H3BSN5 160 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 IL1AP01583 271 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 CD1AP06126 327 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 CDK1P06493 297 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 GZMHP20718 246 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
LIMS1-210ENST00000449684 C6orf141Q5SZD1 244 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 TPTE2P1Q5T6R2 138 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 RSBN1Q5VWQ0 802 aaPredicted RBP12.48□□□□□ -0.41
LIMS1-210ENST00000449684 FAM110DQ8TAY7 271 aaPredicted RBP12.48□□□□□ -0.41
LIMS1-210ENST00000449684 RPEQ96AT9 228 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 DERL3Q96Q80 235 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 IFT22Q9H7X7 185 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 SPACA1Q9HBV2 294 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 TPRKBQ9Y3C4 175 aa12.48□□□□□ -0.41
LIMS1-210ENST00000449684 MEGF11A6BM72 1044 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 MAGEA13PA6NCF6 341 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 MCRIP1C9JLW8 97 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 IGLV1-47P01700 117 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 IGHV3-7P01780 117 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 CD24P25063 80 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 AQP4P55087 323 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 HABP2Q14520 560 aaPredicted RBP12.47□□□□□ -0.41
LIMS1-210ENST00000449684 MED22Q15528 200 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 C16orf82Q7Z2V1 217 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 CDH26Q8IXH8 852 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 MS4A15Q8N5U1 240 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 NKAIN3Q8N8D7 197 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 TOMM40LQ969M1 308 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 MRPS24Q96EL2 167 aaKnown RBP12.47□□□□□ -0.41
LIMS1-210ENST00000449684 OR5M11Q96RB7 305 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 MMP28Q9H239 520 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 ZNF702PQ9H963 129 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 FKBP14Q9NWM8 211 aa12.47□□□□□ -0.41
LIMS1-210ENST00000449684 TET2Q6N021 2002 aaPredicted RBP12.46□□□□□ -0.41
LIMS1-210ENST00000449684 A0A087X0M5 115 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 TRAV39A0A0B4J263 110 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 A0A1B0GX30 115 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 A0A1W2PP11 408 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 ERICH4A6NGS2 130 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 FAM90A22PA8MWA6 464 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 OOSP1A8MZH6 123 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 H0YHG0 523 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 J3QR06 171 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 CRTAPO75718 401 aaPredicted RBP12.46□□□□□ -0.41
LIMS1-210ENST00000449684 SSTR5P35346 364 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 VDAC2P45880 294 aaPredicted RBP12.46□□□□□ -0.41
LIMS1-210ENST00000449684 GNG10P50151 68 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 PAX5Q02548 391 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 SPHARQ15513 63 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 ACSM3Q53FZ2 586 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 OR10A7Q8NGE5 316 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 OR10X1Q8NGY0 326 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 CCDC107Q8WV48 283 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 LEAP2Q969E1 77 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 TMED9Q9BVK6 235 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 ZNF581Q9P0T4 197 aa12.46□□□□□ -0.41
LIMS1-210ENST00000449684 WNK1Q9H4A3 2382 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 AIPO00170 330 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 FBXO24O75426 580 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 TSPAN15O95858 294 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 FAM106CPP0CH98 169 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 CGB3P0DN86 165 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 CGB7P0DN87 165 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 BLCAPP62952 87 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 MADCAM1Q13477 382 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 RNLSQ5VYX0 342 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 SLC16A12Q6ZSM3 486 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 ARL11Q969Q4 196 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 UQCC2Q9BRT2 126 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 SLC25A33Q9BSK2 321 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 SELENOIQ9C0D9 397 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 CCDC90BQ9GZT6 254 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 BANF2Q9H503 90 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 LIN7BQ9HAP6 207 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms