RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 P2RY1P47900 373 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 FOXL2P58012 376 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 SUMO1P63165 101 aaKnown RBP8.91□□□□□ -0.98
SCN10A-201ENST00000449082 UBE2L3P68036 154 aaKnown RBP8.91□□□□□ -0.98
SCN10A-201ENST00000449082 DTD1Q8TEA8 209 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 MMP24Q9Y5R2 645 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 DXOO77932 396 aaKnown RBP8.91□□□□□ -0.98
SCN10A-201ENST00000449082 DYNLT3P51808 116 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 TPPP2P59282 170 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 C19orf35Q6ZS72 473 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 ZNF561Q8N587 486 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 ADAMTS17Q8TE56 1095 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 ABHD1Q96SE0 405 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 CCL28Q9NRJ3 127 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 SF3B6Q9Y3B4 125 aaKnown RBP8.91□□□□□ -0.98
SCN10A-201ENST00000449082 LIPGQ9Y5X9 500 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 ARG1P05089 322 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 VDAC1P21796 283 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 RPS4XP62701 263 aaKnown RBP8.91□□□□□ -0.98
SCN10A-201ENST00000449082 PAFAH1B2P68402 229 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 AESQ08117 197 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 KCNMB1Q16558 191 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 FAM181AQ8N9Y4 354 aa8.91□□□□□ -0.98
SCN10A-201ENST00000449082 SYNGR1O43759 233 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 GREM1O60565 184 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 MBPP02686 304 aaPredicted RBP8.9□□□□□ -0.98
SCN10A-201ENST00000449082 HLA-GP17693 338 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 C8orf82Q6P1X6 216 aaPredicted RBP8.9□□□□□ -0.98
SCN10A-201ENST00000449082 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 ZNF519Q8TB69 540 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 ASCL3Q9NQ33 180 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 RGPD3A6NKT7 1758 aaPredicted RBP8.9□□□□□ -0.98
SCN10A-201ENST00000449082 IFNL4K9M1U5 179 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 PTP4A3O75365 173 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 GYPAP02724 150 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 AANATQ16613 207 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 SHISA5Q8N114 240 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 C11orf42Q8N5U0 333 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 PLSCR3Q9NRY6 295 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 FBXL17Q9UF56 701 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 WISP3O95389 354 aaPredicted RBP8.9□□□□□ -0.98
SCN10A-201ENST00000449082 ASAH2BP0C7U1 165 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 DAOP14920 347 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 CCL8P80075 99 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 PSG4Q00888 419 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 SLC25A42Q86VD7 318 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 TCAPO15273 167 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 GALR1P47211 349 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 GAMTQ14353 236 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 MMDQ15546 238 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 CLEC18BQ6UXF7 455 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 FAM219AQ8IW50 185 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 OR1L8Q8NGR8 309 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 SLC2A8Q9NY64 477 aa8.9□□□□□ -0.98
SCN10A-201ENST00000449082 SPAG17Q6Q759 2223 aa8.9□□□□□ -0.99
SCN10A-201ENST00000449082 PTTG1IPP53801 180 aa8.9□□□□□ -0.99
SCN10A-201ENST00000449082 GGTLC2Q14390 218 aa8.9□□□□□ -0.99
SCN10A-201ENST00000449082 TEX30Q5JUR7 227 aa8.9□□□□□ -0.99
SCN10A-201ENST00000449082 ZNF714Q96N38 554 aa8.9□□□□□ -0.99
SCN10A-201ENST00000449082 ABHD14AQ9BUJ0 271 aa8.9□□□□□ -0.99
SCN10A-201ENST00000449082 A0A0U1RQV5 110 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 MMP7P09237 267 aaPredicted RBP8.89□□□□□ -0.99
SCN10A-201ENST00000449082 HOXB1P14653 301 aaPredicted RBP8.89□□□□□ -0.99
SCN10A-201ENST00000449082 CSF2RBP32927 897 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 TRBV23-1A0A0A0MS06 115 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 KRTDAPP60985 99 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 SPCS3P61009 180 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 ECSCRQ19T08 205 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 RPEL1Q2QD12 228 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 CEACAM21Q3KPI0 293 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 ZNF658BQ4V348 819 aaPredicted RBP8.89□□□□□ -0.99
SCN10A-201ENST00000449082 ADAT3Q96EY9 351 aaPredicted RBP8.89□□□□□ -0.99
SCN10A-201ENST00000449082 MANBALQ9NQG1 85 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 HS3ST3B1Q9Y662 390 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 CHST1O43916 411 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 OR4D10Q8NGI6 311 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 CISD1Q9NZ45 108 aaKnown RBP8.89□□□□□ -0.99
SCN10A-201ENST00000449082 NAT8BQ9UHF3 227 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 SCN3AQ9NY46 2000 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 ARFGEF1Q9Y6D6 1849 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 CENPVL1A0A0U1RR11 272 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 RPL30P62888 115 aaKnown RBP8.89□□□□□ -0.99
SCN10A-201ENST00000449082 PERPQ96FX8 193 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 MARVELD1Q9BSK0 173 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 PRDM6Q9NQX0 595 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 SLC7A10Q9NS82 523 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 ZDHHC8Q9ULC8 765 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 MIA3Q5JRA6 1907 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 IFI6P09912 130 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 VSIG8P0DPA2 414 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 RBM11P57052 281 aaKnown RBP8.89□□□□□ -0.99
SCN10A-201ENST00000449082 TMEM33P57088 247 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 LSM11P83369 360 aaKnown RBP eCLIP8.89□□□□□ -0.99
SCN10A-201ENST00000449082 CLLU1Q5K131 121 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 RBPMS2Q6ZRY4 209 aaKnown RBP8.89□□□□□ -0.99
SCN10A-201ENST00000449082 KLHDC1Q8N7A1 406 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 LILRB1Q8NHL6 650 aaPredicted RBP8.89□□□□□ -0.99
SCN10A-201ENST00000449082 PHYHIPLQ96FC7 376 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 RSRP1Q9BUV0 290 aa8.89□□□□□ -0.99
SCN10A-201ENST00000449082 COL4A1P02462 1669 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms