RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 VSTM5A8MXK1 200 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 IFNL4K9M1U5 179 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 SLC33A1O00400 549 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 HSPB6O14558 160 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 PTBP3O95758 552 aaKnown RBP8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 HAND1O96004 215 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 PPYP01298 95 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 PI3P19957 117 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 LMO1P25800 156 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 CFHR2P36980 270 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 SNRPD2P62316 118 aaKnown RBP8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 SUPT4H1P63272 117 aaKnown RBP8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 HLA-DRB3P79483 266 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 SLC9A3R2Q15599 337 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 LGALSLQ3ZCW2 172 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 WDR82Q6UXN9 313 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 FAM90A1Q86YD7 464 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 C11orf53Q8IXP5 236 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 RELL2Q8NC24 303 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 OR2Z1Q8NG97 314 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 OR5T2Q8NGG2 359 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 TOMM40LQ969M1 308 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 DMRTA2Q96SC8 542 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 SUCNR1Q9BXA5 334 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 NMES1Q9C002 83 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 FXYD6Q9H0Q3 95 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 TMEM165Q9HC07 324 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 MEMO1Q9Y316 297 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 FRYQ5TBA9 3013 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 hCG_1807616A0A1W2PRN6 198 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 FAM25EA8MYX2 175 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 ATP6V1G2-DDX39BF2Z307 99 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 M0R233 179 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 SIRPB1O00241 398 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 TSC22D2O75157 780 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 SLC25A4P12235 298 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 RPS2P15880 293 aaKnown RBP8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 TNFSF4P23510 183 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 S100GP29377 79 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 CCKARP32238 428 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 PIGPP57054 158 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 FXYD4P59646 89 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 ID3Q02535 119 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 Q5BKY6 102 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 TMEM65Q6PI78 240 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 ACP7Q6ZNF0 438 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 ZNF497Q6ZNH5 498 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 GAPTQ8N292 157 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 ZNF565Q8N9K5 539 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 TMEM171Q8WVE6 324 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 ELMOD3Q96FG2 381 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 GALNT14Q96FL9 552 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 METTL8Q9H825 291 aaKnown RBP8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 SEBOXQ9HB31 216 aaPredicted RBP8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 TAAR3PQ9P1P4 343 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 ZDHHC8Q9ULC8 765 aa8.93□□□□□ -0.98
VIPAS39-203ENST00000448935 FXYD6-FXYD2A0A087WZ82 144 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 PIGBOS1A0A0B4J2F0 54 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 C1QTNF9BB2RNN3 333 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 NPIPB11E5RHQ5 1161 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 BET1O15155 118 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 ATP6V1G1O75348 118 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 IFNA21P01568 189 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 SCTP09683 121 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 RPA2P15927 270 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 AADACP22760 399 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 SERPINF1P36955 418 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 CA7P43166 264 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 ASCL1P50553 236 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 SRPXP78539 464 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 SORDQ00796 357 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 IGSF11Q5DX21 431 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 PRAMEF6Q5VXH4 476 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 UNQ6494/PRO21346Q6UXR6 183 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 Q6ZPA2 131 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 OR10J5Q8NHC4 309 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 LILRB1Q8NHL6 650 aaPredicted RBP8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 THAP6Q8TBB0 222 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 RTN4IP1Q8WWV3 396 aaPredicted RBP8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 ZCCHC14Q8WYQ9 949 aaKnown RBP8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 MRPL24Q96A35 216 aaKnown RBP8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 LRRC46Q96FV0 321 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 KIRREL1Q96J84 757 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 DIRC2Q96SL1 478 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 CABLES2Q9BTV7 478 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 LIME1Q9H400 295 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 NAA60Q9H7X0 242 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 OR14J1Q9UGF5 321 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 TRAPPC2LQ9UL33 140 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 WIPI2Q9Y4P8 454 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 PTPRQQ9UMZ3 2332 aa8.92□□□□□ -0.98
VIPAS39-203ENST00000448935 C13orf42A0A1B0GVH6 325 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 TMEM30CPA0ZSE6 113 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 CCSO14618 274 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 ARPC5O15511 151 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 TUSC2O75896 110 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 IFNA7P01567 189 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 PET100P0DJ07 73 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 S100A11P31949 105 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 RND3P61587 244 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms