RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 RFESDQ8TAC1 157 aa10.51□□□□□ -0.73
HMGB3-204ENST00000448905 TFAP2CQ92754 450 aa10.51□□□□□ -0.73
HMGB3-204ENST00000448905 RNF166Q96A37 237 aaPredicted RBP10.51□□□□□ -0.73
HMGB3-204ENST00000448905 PPIL3Q9H2H8 161 aaKnown RBP10.51□□□□□ -0.73
HMGB3-204ENST00000448905 OAZ3Q9UMX2 235 aa10.51□□□□□ -0.73
HMGB3-204ENST00000448905 DHDHQ9UQ10 334 aa10.51□□□□□ -0.73
HMGB3-204ENST00000448905 DNAH3Q8TD57 4116 aa10.51□□□□□ -0.73
HMGB3-204ENST00000448905 OR4C45A6NMZ5 311 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 NPIPB11E5RHQ5 1161 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 CCL24O00175 119 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 CCRL2O00421 344 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 MPZL2O60487 215 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 ZFPL1O95159 310 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 IGKV1D-33P01593 117 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 IGKV1-33P01594 117 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 IGHV3-7P01780 117 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 RAB3AP20336 220 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 SNRPGP62308 76 aaKnown RBP10.5□□□□□ -0.73
HMGB3-204ENST00000448905 LTC4SQ16873 150 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 ETV3LQ6ZN32 361 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 TGIF2LXQ8IUE1 241 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 STPG2Q8N412 459 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 PARP16Q8N5Y8 322 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 OR5M8Q8NGP6 311 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 OR13A1Q8NGR1 328 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 OR2T10Q8NGZ9 312 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 OR5AK2Q8NH90 309 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 LEAP2Q969E1 77 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 PELI1Q96FA3 418 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 C4orf36Q96KX1 117 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 P2RX4Q99571 388 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 S100A13Q99584 98 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 LINC00527Q9UJ94 153 aa10.5□□□□□ -0.73
HMGB3-204ENST00000448905 SIRT4Q9Y6E7 314 aaPredicted RBP10.5□□□□□ -0.73
HMGB3-204ENST00000448905 A0A1W2PPI3 338 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 TMEM212A6NML5 194 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 H0YHG0 523 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 J3QRE1 110 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 RRP9O43818 475 aaKnown RBP10.49□□□□□ -0.73
HMGB3-204ENST00000448905 ATP5HO75947 161 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 FADS2O95864 444 aaKnown RBP10.49□□□□□ -0.73
HMGB3-204ENST00000448905 IL3RAP26951 378 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 GNG10P50151 68 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 GBX2P52951 348 aaPredicted RBP10.49□□□□□ -0.73
HMGB3-204ENST00000448905 PAX5Q02548 391 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 GALEQ14376 348 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 IL13RA2Q14627 380 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 KIR2DS1Q14954 304 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 KLHL22Q53GT1 634 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 CXorf66Q5JRM2 361 aaPredicted RBP10.49□□□□□ -0.73
HMGB3-204ENST00000448905 C9orf66Q5T8R8 295 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 LHFPL3Q86UP9 236 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 SYS1Q8N2H4 156 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 OR10AC1Q8NH08 325 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 OR8U1Q8NH10 309 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 MRGPRDQ8TDS7 321 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 TNFAIP8L1Q8WVP5 186 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 TSEN15Q8WW01 171 aaKnown RBP10.49□□□□□ -0.73
HMGB3-204ENST00000448905 Q96MT0 163 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 RASL11BQ9BPW5 248 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 DCLRE1BQ9H816 532 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 RAB9BQ9NP90 201 aa10.49□□□□□ -0.73
HMGB3-204ENST00000448905 CHCHD3Q9NX63 227 aaKnown RBP10.49□□□□□ -0.73
HMGB3-204ENST00000448905 EXOGQ9Y2C4 368 aaKnown RBP10.49□□□□□ -0.73
HMGB3-204ENST00000448905 TRAV24A0A0B4J272 114 aa10.48□□□□□ -0.73
HMGB3-204ENST00000448905 HSD17B6O14756 317 aa10.48□□□□□ -0.73
HMGB3-204ENST00000448905 CSTBP04080 98 aaKnown RBP10.48□□□□□ -0.73
HMGB3-204ENST00000448905 CDX1P47902 265 aaPredicted RBP10.48□□□□□ -0.73
HMGB3-204ENST00000448905 ZP1P60852 638 aa10.48□□□□□ -0.73
HMGB3-204ENST00000448905 ZNF816Q0VGE8 651 aaPredicted RBP10.48□□□□□ -0.73
HMGB3-204ENST00000448905 EBI3Q14213 229 aa10.48□□□□□ -0.73
HMGB3-204ENST00000448905 LCNL1Q6ZST4 164 aa10.48□□□□□ -0.73
HMGB3-204ENST00000448905 OR8H1Q8NGG4 311 aa10.48□□□□□ -0.73
HMGB3-204ENST00000448905 DPCDQ9BVM2 203 aaPredicted RBP10.48□□□□□ -0.73
HMGB3-204ENST00000448905 ABCG5Q9H222 651 aa10.48□□□□□ -0.73
HMGB3-204ENST00000448905 LIN7CQ9NUP9 197 aaKnown RBP10.48□□□□□ -0.73
HMGB3-204ENST00000448905 PAK1IP1Q9NWT1 392 aaPredicted RBP10.48□□□□□ -0.73
HMGB3-204ENST00000448905 ING4Q9UNL4 249 aa10.48□□□□□ -0.73
HMGB3-204ENST00000448905 U3KQK5 164 aa10.48□□□□□ -0.73
HMGB3-204ENST00000448905 COL7A1Q02388 2944 aa10.48□□□□□ -0.73
HMGB3-204ENST00000448905 IGHV1-3A0A0C4DH29 117 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 SAC3D1A6NKF1 404 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 CIB2O75838 187 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 HTR3BO95264 441 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 MOSP00540 346 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 CD2P06729 351 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 ELANEP08246 267 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 CD1BP29016 333 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 GPR12P47775 334 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 FOXE3Q13461 319 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 GPR50Q13585 617 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 DIAPH2-AS1Q14236 149 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 UTF1Q5T230 341 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 RSBN1Q5VWQ0 802 aaPredicted RBP10.47□□□□□ -0.73
HMGB3-204ENST00000448905 OR52M1Q8NGK5 317 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 ARL11Q969Q4 196 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 RAX2Q96IS3 184 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 EAF1Q96JC9 268 aaPredicted RBP10.47□□□□□ -0.73
HMGB3-204ENST00000448905 ALG8Q9BVK2 526 aa10.47□□□□□ -0.73
HMGB3-204ENST00000448905 JAM3Q9BX67 310 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms