RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 UQCR10Q9UDW1 63 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 RFNGQ9Y644 331 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 MPDZO75970 2070 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 OR6C6A6NF89 314 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 ZFP92A6NM28 416 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 TGFBR3LH3BV60 316 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 MT-ATP6P00846 226 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 SGCBQ16585 318 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 OR5AS1Q8N127 324 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 RNF133Q8WVZ7 376 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 CSTL1Q9H114 145 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 BANF2Q9H503 90 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 MOB1AQ9H8S9 216 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 COX11Q9Y6N1 276 aa16.63■□□□□ 0.25
HMGA1-205ENST00000447654 BMP5P22003 454 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 NKX2-1P43699 371 aaPredicted RBP16.62■□□□□ 0.25
HMGA1-205ENST00000447654 RPL23P62829 140 aaKnown RBP16.62■□□□□ 0.25
HMGA1-205ENST00000447654 ACKR1Q16570 336 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 DNM1P34Q6PK57 102 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 D2HGDHQ8N465 521 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 OR51T1Q8NGJ9 327 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 OR1L6Q8NGR2 347 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 TM2D1Q9BX74 207 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 PXMP4Q9Y6I8 212 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 PROB1E7EW31 1015 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 HRKO00198 91 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 DYNLT3P51808 116 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 KLHL24Q6TFL4 600 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 SYT13Q7L8C5 426 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 STPG4Q8N801 248 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 CCDC71LQ8N9Z2 235 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 KLHDC7BQ96G42 594 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 PAM16Q9Y3D7 125 aa16.62■□□□□ 0.25
HMGA1-205ENST00000447654 ASXL3Q9C0F0 2248 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 IGHV1OR15-9A0A0B4J2B8 117 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 VENTXO95231 258 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 ASCL1P50553 236 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 UCP3P55916 312 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 MAJINQ3KP22 176 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 FNDC7Q5VTL7 733 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 OOSP2Q86WS3 158 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 DEFB123Q8N688 67 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 WDYHV1Q96HA8 205 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 PARD6GQ9BYG4 376 aaPredicted RBP16.61■□□□□ 0.25
HMGA1-205ENST00000447654 PBOV1Q9GZY1 135 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 ANXA10Q9UJ72 324 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 LAMTOR2Q9Y2Q5 125 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 TRAV36DV7A0A075B6V5 113 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 TMEM238C9JI98 176 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 LILRA1O75019 489 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 MPLP40238 635 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 OR3A4PP47883 348 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 TMEM41BQ5BJD5 291 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 Q6ZWC4 215 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 NECAP1Q8NC96 275 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 OR4C3Q8NH37 302 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 ADAMTS18Q8TE60 1221 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 CCDC3Q9BQI4 270 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 ZNF665Q9H7R5 613 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 NECAP2Q9NVZ3 263 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 THADAQ6YHU6 1953 aa16.61■□□□□ 0.25
HMGA1-205ENST00000447654 TRAV30A0A087WSZ9 112 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 DUXBA0A1W2PPF3 345 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 MSTNO14793 375 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 CD99P14209 185 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 BLVRBP30043 206 aaPredicted RBP16.6■□□□□ 0.25
HMGA1-205ENST00000447654 MMDQ15546 238 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 RNF151Q2KHN1 245 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 SP6Q3SY56 376 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 SSC4DQ8WTU2 575 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 IL22RA2Q969J5 263 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 FOXN4Q96NZ1 517 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 ADOQ96SZ5 270 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 PSMG3Q9BT73 122 aaPredicted RBP16.6■□□□□ 0.25
HMGA1-205ENST00000447654 TRAPPC1Q9Y5R8 145 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 WDR1O75083 606 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 OR2J2O76002 312 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 IFNA5P01569 189 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 FOSL2P15408 326 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 RPL19P84098 196 aaKnown RBP16.6■□□□□ 0.25
HMGA1-205ENST00000447654 OTPQ5XKR4 325 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 TMEM256Q8N2U0 113 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 VPS25Q9BRG1 176 aa16.6■□□□□ 0.25
HMGA1-205ENST00000447654 COA3Q9Y2R0 106 aaPredicted RBP16.6■□□□□ 0.25
HMGA1-205ENST00000447654 SEC16AO15027 2179 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 SPAG17Q6Q759 2223 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 IGHV2OR16-5A0A0B4J2B6 119 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 LOC101059948A0A1B0GTJ6 334 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 CEBPZOSA8MTT3 80 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 TIAF1O95411 115 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 ATXN8OSP0DMR3 200 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 SRFP11831 508 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 UCP1P25874 307 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 CTRLP40313 264 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 ZNF133P52736 654 aaPredicted RBP16.59■□□□□ 0.25
HMGA1-205ENST00000447654 CD226Q15762 336 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 KMT5CQ86Y97 462 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 C17orf78Q8N4C9 275 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 BCORP1Q8N888 145 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 TSTD1Q8NFU3 115 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms