RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 OR5R1Q8NH85 324 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 C1orf147Q96MC9 270 aaPredicted RBP13.37□□□□□ -0.27
SF3A1-204ENST00000447376 BANF2Q9H503 90 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 ZNRD1Q9P1U0 126 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 SESN1Q9Y6P5 492 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 MEIKINA0A087WXM9 373 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 TMEM89A2RUT3 159 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 AIREO43918 545 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 MPIG6BO95866 241 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 ARG1P05089 322 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 IER3P46695 156 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 GLIPR1P48060 266 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 RPL15P61313 204 aaKnown RBP13.36□□□□□ -0.27
SF3A1-204ENST00000447376 RBM39Q14498 530 aaKnown RBP13.36□□□□□ -0.27
SF3A1-204ENST00000447376 TAF9Q16594 264 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 OR2W3Q7Z3T1 314 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 C3orf56Q8N813 242 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 DYRK2Q92630 601 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 FAM46BQ96A09 425 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 URM1Q9BTM9 101 aaKnown RBP13.36□□□□□ -0.27
SF3A1-204ENST00000447376 DPCDQ9BVM2 203 aaPredicted RBP13.36□□□□□ -0.27
SF3A1-204ENST00000447376 TMEM59Q9BXS4 323 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 STEAP1Q9UHE8 339 aa13.36□□□□□ -0.27
SF3A1-204ENST00000447376 TBL2Q9Y4P3 447 aaKnown RBP13.36□□□□□ -0.27
SF3A1-204ENST00000447376 TRAV24A0A0B4J272 114 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 A0A1W2PP11 408 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 ZNF729A6NN14 1252 aaPredicted RBP13.35□□□□□ -0.27
SF3A1-204ENST00000447376 IFITM5A6NNB3 132 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 MCRIP1C9JLW8 97 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 HAX1O00165 279 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 SMIM18P0DKX4 95 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 VSIG8P0DPA2 414 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 HKR1P10072 659 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 GLP1RP43220 463 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 DLX6P56179 175 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 P2RY14Q15391 338 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 FAM189A2Q15884 450 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 SUMF2Q8NBJ7 301 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 BEND2Q8NDZ0 799 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 TMEM104Q8NE00 496 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 CORO2AQ92828 525 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 FAM3DQ96BQ1 224 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 YIPF6Q96EC8 236 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 GFI1Q99684 422 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 CHIAQ9BZP6 476 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 TMEM133Q9H2Q1 129 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 NCOR1P1Q9H4R4 102 aa13.35□□□□□ -0.27
SF3A1-204ENST00000447376 NOTOA8MTQ0 251 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 AIPO00170 330 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 IGHV4-59P01825 116 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 FUT3P21217 361 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 CDK2P24941 298 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 CFPP27918 469 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 COMPP49747 757 aaPredicted RBP13.34□□□□□ -0.27
SF3A1-204ENST00000447376 OR10A3P58181 314 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 RPS27AP62979 156 aaKnown RBP13.34□□□□□ -0.27
SF3A1-204ENST00000447376 HES5Q5TA89 166 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 HCP5Q6MZN7 132 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 HEPN1Q6WQI6 88 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 RTN4RL2Q86UN3 420 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 C11orf42Q8N5U0 333 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 Q96M66 194 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 CLEC7AQ9BXN2 247 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 RAB9BQ9NP90 201 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 ABCB10Q9NRK6 738 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 KIF25Q9UIL4 384 aa13.34□□□□□ -0.27
SF3A1-204ENST00000447376 SHISA3A0PJX4 238 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 TMEM30CPA0ZSE6 113 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 FAM181BA6NEQ2 426 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 TMEM14DPA8MWL7 114 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 TOR1AO14656 332 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 GLAP06280 429 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 SDC2P34741 201 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 ARHGDIBP52566 201 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 LRRC75BQ2VPJ9 315 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 C2orf76Q3KRA6 126 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 OR10K2Q6IF99 312 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 RAB12Q6IQ22 244 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 TCF23Q7RTU1 214 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 OR11H6Q8NGC7 330 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 OR51D1Q8NGF3 324 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 OR13F1Q8NGS4 319 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 NDNFQ8TB73 568 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 ZNF596Q8TC21 504 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 CREB3L1Q96BA8 519 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 COQ2Q96H96 371 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 NEDD4LQ96PU5 975 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 CENPOQ9BU64 300 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 FBLN5Q9UBX5 448 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 VPREB3Q9UKI3 123 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 PEX16Q9Y5Y5 336 aa13.33□□□□□ -0.28
SF3A1-204ENST00000447376 IGHV2-26A0A0B4J1V2 119 aa13.32□□□□□ -0.28
SF3A1-204ENST00000447376 A0A1B0GUS0 222 aa13.32□□□□□ -0.28
SF3A1-204ENST00000447376 CLDN12P56749 244 aa13.32□□□□□ -0.28
SF3A1-204ENST00000447376 QRFPP83859 136 aa13.32□□□□□ -0.28
SF3A1-204ENST00000447376 PAX5Q02548 391 aa13.32□□□□□ -0.28
SF3A1-204ENST00000447376 AANATQ16613 207 aa13.32□□□□□ -0.28
SF3A1-204ENST00000447376 MINOS1Q5TGZ0 78 aa13.32□□□□□ -0.28
SF3A1-204ENST00000447376 PRAMEF5Q5TYX0 476 aa13.32□□□□□ -0.28
SF3A1-204ENST00000447376 ZNF626Q68DY1 528 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms