RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ZNF565Q8N9K5 539 aa8.08□□□□□ -1.12
COL6A4P1-201ENST00000446690 Q8NA96 180 aa8.08□□□□□ -1.12
COL6A4P1-201ENST00000446690 IL1F10Q8WWZ1 152 aa8.08□□□□□ -1.12
COL6A4P1-201ENST00000446690 SYT3Q9BQG1 590 aa8.08□□□□□ -1.12
COL6A4P1-201ENST00000446690 SFXN3Q9BWM7 321 aa8.08□□□□□ -1.12
COL6A4P1-201ENST00000446690 CXXC4Q9H2H0 198 aa8.08□□□□□ -1.12
COL6A4P1-201ENST00000446690 NAA60Q9H7X0 242 aa8.08□□□□□ -1.12
COL6A4P1-201ENST00000446690 ATP23Q9Y6H3 246 aa8.08□□□□□ -1.12
COL6A4P1-201ENST00000446690 TMEM210A6NLX4 147 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 SH2D1BO14796 132 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 PHF1O43189 567 aaPredicted RBP8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 IFNA21P01568 189 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 PGA5P0DJD9 388 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 HERPUD1Q15011 391 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 ACOT7LQ6ZUV0 252 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 LRP11Q86VZ4 500 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 OR2Z1Q8NG97 314 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 PIK3IP1Q96FE7 263 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 C2orf50Q96LR7 162 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 NRIP2Q9BQI9 281 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 RIMS4Q9H426 269 aaPredicted RBP8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 RASL12Q9NYN1 266 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 ZMAT5Q9UDW3 170 aaKnown RBP8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 POM121CA8CG34 1229 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 SLC33A1O00400 549 aaPredicted RBP8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 HSD17B6O14756 317 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 NUPL2O15504 423 aaKnown RBP8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 OR2F2O95006 317 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 CRYAAP02489 173 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 CEACAM8P31997 349 aaPredicted RBP8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 ERVK11-1P61568 191 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 OR2F1Q13607 317 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 RAB32Q13637 225 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 IAH1Q2TAA2 248 aaPredicted RBP8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 PRR30Q53SZ7 412 aaPredicted RBP8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 ZNF324BQ6AW86 544 aaPredicted RBP8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 UBALD1Q8TB05 177 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 MRPL24Q96A35 216 aaKnown RBP8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 KIRREL1Q96J84 757 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 GPHA2Q96T91 129 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 RNF126Q9BV68 326 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 RHOFQ9HBH0 211 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 TRAPPC2LQ9UL33 140 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 SSUH2Q9Y2M2 353 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 MSRB2Q9Y3D2 182 aa8.07□□□□□ -1.12
COL6A4P1-201ENST00000446690 BSNQ9UPA5 3926 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 DSPP15924 2871 aaKnown RBP8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 IGKV1-6A0A0C4DH72 117 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 A0A0G2JNJ9 132 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 RNF222A6NCQ9 220 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 A8MXE2 369 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 SCGB1D2O95969 90 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 TFF1P04155 84 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 KITLGP21583 273 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 TUBG1P23258 451 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 GNRHRP30968 328 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 UCP3P55916 312 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 SRSF7Q16629 238 aaKnown RBP eCLIP8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 MBNL2Q5VZF2 373 aaKnown RBP8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 GGNBP1Q5YKI7 109 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 FIP1L1Q6UN15 594 aaKnown RBP8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 MEX3BQ6ZN04 569 aaKnown RBP8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 Q6ZS49 121 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 C11orf53Q8IXP5 236 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 KCNRGQ8N5I3 272 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 CCDC71LQ8N9Z2 235 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 OR10J5Q8NHC4 309 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 GTF3AQ92664 365 aaKnown RBP8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 SNRNP40Q96DI7 357 aaKnown RBP8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 RSRP1Q9BUV0 290 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 ZNF471Q9BX82 626 aaPredicted RBP8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 SLC5A7Q9GZV3 580 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 TUBG2Q9NRH3 451 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 OR5AC2Q9NZP5 309 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 Q9UFV3 132 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 GLS2Q9UI32 602 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 MEMO1Q9Y316 297 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 ATMQ13315 3056 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 A8MXK9 166 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 H0YIZ8 118 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 TNFSF12O43508 249 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 HAND1O96004 215 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 TDGF1P3P51864 188 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 LUMP51884 338 aaPredicted RBP8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 TMEM187Q14656 261 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 C22orf34Q6ZV56 151 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 LYZL2Q7Z4W2 148 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 POC1AQ8NBT0 407 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 PLPPR1Q8TBJ4 325 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 CXorf58Q96LI9 332 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 IFT22Q9H7X7 185 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 ASF1BQ9NVP2 202 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 MED9Q9NWA0 146 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 KLF2Q9Y5W3 355 aaPredicted RBP8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 SESN1Q9Y6P5 492 aa8.06□□□□□ -1.12
COL6A4P1-201ENST00000446690 GTF3C1Q12789 2109 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 IGKV1D-13A0A0B4J2D9 117 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 C3orf85A0A1B0GTC6 90 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 KRBOX1C9JBD0 128 aa8.05□□□□□ -1.12
COL6A4P1-201ENST00000446690 F5H0A9 414 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms