RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 ESCO2Q56NI9 601 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 LRRC10Q5BKY1 277 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 C4orf48Q5BLP8 95 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 OR52W1Q6IF63 320 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 FAAP20Q6NZ36 180 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 DNM1P46Q6ZS02 220 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 TCF23Q7RTU1 214 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 SLC36A1Q7Z2H8 476 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 SLC51BQ86UW2 128 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 LRRC75A-AS1Q8N1F1 130 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 MUC20Q8N307 709 aaPredicted RBP6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 PNKDQ8N490 385 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 ZNF561Q8N587 486 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 FAM89BQ8N5H3 189 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 OR10V1Q8NGI7 309 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 OR52I2Q8NH67 350 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 OR1L1Q8NH94 360 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 MRPL30Q8TCC3 161 aaKnown RBP6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 KCTD12Q96CX2 325 aaKnown RBP6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 SDSLQ96GA7 329 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 SNX22Q96L94 193 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 CMSS1Q9BQ75 279 aaKnown RBP6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 ABCG5Q9H222 651 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 MMP27Q9H306 513 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 DIABLOQ9NR28 239 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 PCDHB16Q9NRJ7 776 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 TRAPPC2LQ9UL33 140 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 V9GYH0 126 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 ITPR2Q14571 2701 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 LOC105371242A0A075B767 164 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 A0A096LNT2 108 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 LOC105371267A0A1B0GV96 52 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 KIAA1324LA8MWY0 1029 aaPredicted RBP6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 F5H0A9 414 aaPredicted RBP6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 K7N7A8 449 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 M0QYG6 137 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 XRCC3O43542 346 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 APOA1P02647 267 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 CSF3P09919 207 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 CTRB1P17538 263 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 BTF3P20290 206 aaKnown RBP6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 COX7A1P24310 79 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 NFYBP25208 207 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 TALDO1P37837 337 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 MRPS15P82914 257 aaKnown RBP6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 GNMTQ14749 295 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 KCNJ8Q15842 424 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 TMEM155Q4W5P6 130 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 NHLRC3Q5JS37 347 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 RSBN1Q5VWQ0 802 aaPredicted RBP6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 TMEM200BQ69YZ2 307 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 CTRB2Q6GPI1 263 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 NLRC3Q7RTR2 1065 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 OR8H2Q8N162 312 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 Q8NFD4 153 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 SVIPQ8NHG7 77 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 IL1F10Q8WWZ1 152 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 DMRTB1Q96MA1 342 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 CITED4Q96RK1 184 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 FOXC2Q99958 501 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 SIRT7Q9NRC8 400 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 RCC2Q9P258 522 aaKnown RBP6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 FBLN5Q9UBX5 448 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 MIOXQ9UGB7 285 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 ADAM30Q9UKF2 790 aa6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 SOX21Q9Y651 276 aaPredicted RBP6.24□□□□□ -1.41
SF3A3P1-201ENST00000446317 PPIAL4CA0A0B4J2A2 164 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 TMEM30CPA0ZSE6 113 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 ODAMA1E959 279 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 NDUFS8O00217 210 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 SDCBPO00560 298 aaPredicted RBP6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 MGST3O14880 152 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 PMP2P02689 132 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 MT-ND4P03905 459 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 FCGR3AP08637 254 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 SCTP09683 121 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 PPIAL4GP0DN37 164 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 IGHV4-31P0DP07 118 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 SLC25A16P16260 332 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 HLA-DMAP28067 261 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 GNG10P50151 68 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 P2RX3P56373 397 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 DSCR9P59020 149 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 RPL31P62899 125 aaKnown RBP6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 ZNF79Q15937 498 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 FAHD2BQ6P2I3 314 aaPredicted RBP6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 ZNF497Q6ZNH5 498 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 CCDC190Q86UF4 302 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 LILRB2Q8N423 598 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 MFSD4AQ8N468 514 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 OR52L2PQ8NGH6 319 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 RAB40AQ8WXH6 277 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 MSI2Q96DH6 328 aaKnown RBP6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 MRPS24Q96EL2 167 aaKnown RBP6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 FAHD2AQ96GK7 314 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 NUDT16L1Q9BRJ7 211 aaKnown RBP6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 PCGF1Q9BSM1 259 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 SUCNR1Q9BXA5 334 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 TMPRSS13Q9BYE2 586 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 PARP12Q9H0J9 701 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms