RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 NDNFQ8TB73 568 aa8.72□□□□□ -1.01
SF3A1-203ENST00000444440 LEAP2Q969E1 77 aa8.72□□□□□ -1.01
SF3A1-203ENST00000444440 CNBD2Q96M20 576 aa8.72□□□□□ -1.01
SF3A1-203ENST00000444440 METTL9Q9H1A3 318 aa8.72□□□□□ -1.01
SF3A1-203ENST00000444440 DUSP21Q9H596 190 aa8.72□□□□□ -1.01
SF3A1-203ENST00000444440 TAS2R3Q9NYW6 316 aa8.72□□□□□ -1.01
SF3A1-203ENST00000444440 KIF25Q9UIL4 384 aa8.72□□□□□ -1.01
SF3A1-203ENST00000444440 MINOS1-NBL1R4GNA1 71 aa8.72□□□□□ -1.01
SF3A1-203ENST00000444440 A0A1W2PPK0 400 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 LY6LH3BQJ8 138 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 PIN1P1O15428 100 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 ZNF780AO75290 641 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-203ENST00000444440 HTR3BO95264 441 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 CSTBP04080 98 aaKnown RBP8.71□□□□□ -1.02
SF3A1-203ENST00000444440 VSIG10L2P0DP72 767 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 GLP1RP43220 463 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 DIAPH2-AS1Q14236 149 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 GPR176Q14439 515 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 IL13RA2Q14627 380 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 PAN3Q58A45 887 aaKnown RBP8.71□□□□□ -1.02
SF3A1-203ENST00000444440 FAM53AQ6NSI3 398 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-203ENST00000444440 LIAT1Q6ZQX7 453 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 C1QL4Q86Z23 238 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 OR2T6Q8NHC8 308 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 SGCDQ92629 289 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 KIRREL1Q96J84 757 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 OR14A2Q96R54 314 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 NPFFR1Q9GZQ6 430 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 CCDC90BQ9GZT6 254 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 GAL3ST2Q9H3Q3 398 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 RAB18Q9NP72 206 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 ABCB10Q9NRK6 738 aa8.71□□□□□ -1.02
SF3A1-203ENST00000444440 A0A087X0M5 115 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 TRBV5-7A0A0A0MS05 114 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 A0A1B0GX30 115 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 SH2D7A6NKC9 451 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-203ENST00000444440 ZNF729A6NN14 1252 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-203ENST00000444440 ADARB2-AS1A8MUL3 147 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 F2RL2O00254 374 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 GEMIN2O14893 280 aaKnown RBP8.7□□□□□ -1.02
SF3A1-203ENST00000444440 AMY1AP04745 511 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 AMY2AP04746 511 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 CD28P10747 220 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 FSTP19883 344 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 SERPINA2P20848 420 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 CRHBPP24387 322 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 NFYBP25208 207 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 HTR1DP28221 377 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 SSTR5P35346 364 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 RBM11P57052 281 aaKnown RBP8.7□□□□□ -1.02
SF3A1-203ENST00000444440 INSL4Q14641 139 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 IRF3Q14653 427 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 TRAM1Q15629 374 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 LTC4SQ16873 150 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 HLA-DRB5Q30154 266 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 ACSM3Q53FZ2 586 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 PRSS48Q7RTY5 328 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 LYPD6Q86Y78 171 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 SUMF2Q8NBJ7 301 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 DERL3Q96Q80 235 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 OR5M11Q96RB7 305 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 ZNF184Q99676 751 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-203ENST00000444440 WNT10AQ9GZT5 417 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 ISYNA1Q9NPH2 558 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 CALYQ9NYX4 217 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 IL36GQ9NZH8 169 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 DPM3Q9P2X0 92 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 DNAH9Q9NYC9 4486 aa8.7□□□□□ -1.02
SF3A1-203ENST00000444440 MEIKINA0A087WXM9 373 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 KBTBD11-OT1A0A1B0GTJ5 212 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 NPIPB11E5RHQ5 1161 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 BUB1B-PAK6H3BSN5 160 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 MAS1P04201 325 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 CSF1P09603 554 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 HSMCR30P0CW71 290 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 GP2P55259 537 aaKnown RBP8.69□□□□□ -1.02
SF3A1-203ENST00000444440 PAX5Q02548 391 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 C2orf68Q2NKX9 166 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 PDLIM3Q53GG5 364 aaPredicted RBP8.69□□□□□ -1.02
SF3A1-203ENST00000444440 NHLRC3Q5JS37 347 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 TPTE2P1Q5T6R2 138 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 Q6ZTK2 550 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 RTN4RL2Q86UN3 420 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 OSR2Q8N2R0 312 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 JAGN1Q8N5M9 183 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 NKAIN3Q8N8D7 197 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 RFESDQ8TAC1 157 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 UBALD1Q8TB05 177 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 MRGPRDQ8TDS7 321 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 UFD1Q92890 307 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 RBMXL1Q96E39 390 aaKnown RBP8.69□□□□□ -1.02
SF3A1-203ENST00000444440 OCSTAMPQ9BR26 566 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 TMED9Q9BVK6 235 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 DPCDQ9BVM2 203 aaPredicted RBP8.69□□□□□ -1.02
SF3A1-203ENST00000444440 BARHL1Q9BZE3 327 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 IDI2-AS1Q9NZ38 188 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 OR6C3Q9NZP0 311 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 ST3GAL6Q9Y274 331 aa8.69□□□□□ -1.02
SF3A1-203ENST00000444440 LSM2Q9Y333 95 aaKnown RBP8.69□□□□□ -1.02
SF3A1-203ENST00000444440 A0A1W2PPE3 182 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms