RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MFAP5Q13361 173 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 C9orf40Q8IXQ3 194 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 RPRMQ9NS64 109 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 ALKBH4Q9NXW9 302 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 CLEC18AA5D8T8 446 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 CBR3O75828 277 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 CTXN2P0C2S0 81 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 IAPPP10997 89 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 TSPAN7P41732 249 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 FUT7Q11130 342 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 MAJINQ3KP22 176 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 CLEC18CQ8NCF0 446 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 OR51G1Q8NGK1 321 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 CTHRC1Q96CG8 243 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 SGIP1Q9BQI5 828 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 HDHD3Q9BSH5 251 aaPredicted RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 KCNS2Q9ULS6 477 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 ZNF816-ZNF321PA0A0X1KG74 233 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 A0A1W2PP11 408 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 ZNF321PQ8N8H1 164 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 TMEM52Q8NDY8 209 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 GSX1Q9H4S2 264 aaPredicted RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 RFNGQ9Y644 331 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 PRRT4C9JH25 899 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 ITGB1BP1O14713 200 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 CDKN1BP46527 198 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 RBKSQ9H477 322 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 RPH3ALQ9UNE2 315 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 FRG2CA6NGY1 282 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 NPIPA2E9PIF3 369 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 FCN1O00602 326 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 CD55P08174 381 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 HNRNPA2B1P22626 353 aaKnown RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 SELENOHQ8IZQ5 122 aaKnown RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 TCTEX1D1Q8N7M0 179 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 ZNF385AQ96PM9 386 aaKnown RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 SMIM10L1P0DMW3 83 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 CDAP32320 146 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 SHHQ15465 462 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 SPATA45Q537H7 98 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 MAML2Q8IZL2 1156 aaPredicted RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 FAM58AQ8N1B3 248 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 NUDT10Q8NFP7 164 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 ASB10Q8WXI3 467 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 OR1E3Q8WZA6 343 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 PIGTQ969N2 578 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 SMIM10Q96HG1 83 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 AURKAIP1Q9NWT8 199 aaPredicted RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 PSENENQ9NZ42 101 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 TRAF3IP2O43734 574 aaPredicted RBP4.37□□□□□ -1.71
HERC1-201ENST00000443617 CD99P14209 185 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 ZNF77Q15935 545 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 FGF14Q92915 247 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 ALG1L2C9J202 215 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 LMO1P25800 156 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 GABRA2P47869 451 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 DEFB110Q30KQ9 67 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 LRTM2Q8N967 370 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 SGMS2Q8NHU3 365 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 MBD3L1Q8WWY6 194 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 LRRC3BQ96PB8 259 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 MANBALQ9NQG1 85 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 LRRC37AA6NMS7 1700 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 OR6C6A6NF89 314 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 CCL25O15444 150 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 HLA-DRB5Q30154 266 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 Q6ZWC4 215 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 RSG1Q9BU20 258 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 SOHLH2Q9NX45 425 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 WASHC3Q9Y3C0 194 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 MRPS18CQ9Y3D5 142 aaKnown RBP4.37□□□□□ -1.71
HERC1-201ENST00000443617 PLPPR5Q32ZL2 321 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 TBC1D26Q86UD7 250 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 FAM89BQ8N5H3 189 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 ZNF596Q8TC21 504 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 PILRAQ9UKJ1 303 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 ACACAQ13085 2346 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 CRISP2P16562 243 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 BMP5P22003 454 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 MMDQ15546 238 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 EMC6Q9BV81 110 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 PAX1P15863 534 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 TNFSF4P23510 183 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 PLAURQ03405 335 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 C1QL2Q7Z5L3 287 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 OR5AU1Q8NGC0 362 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 IMMP2LQ96T52 175 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 MED29Q9NX70 200 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 MDFIC2A0A1B0GVS7 189 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 LHFPL1Q86WI0 220 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 OR11L1Q8NGX0 322 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 TMEM171Q8WVE6 324 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 PP6455Q8WZ26 134 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.37□□□□□ -1.71
HERC1-201ENST00000443617 LILRA1O75019 489 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 CTSEP14091 401 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 SELENOTP62341 195 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 GAPTQ8N292 157 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 P2RX4Q99571 388 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 PSMG3Q9BT73 122 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms