RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, human

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-208	ENST00000443046	ZNF491	Q8N8L2	437 aa		11.17	□□□□□ -0.62
HMGN1-208	ENST00000443046	TMEM163	Q8TC26	289 aa		11.17	□□□□□ -0.62
HMGN1-208	ENST00000443046	CANT1	Q8WVQ1	401 aa		11.17	□□□□□ -0.62
HMGN1-208	ENST00000443046	DNAJC9	Q8WXX5	260 aa		11.17	□□□□□ -0.62
HMGN1-208	ENST00000443046	RFT1	Q96AA3	541 aa		11.17	□□□□□ -0.62
HMGN1-208	ENST00000443046	ASB9	Q96DX5	294 aa		11.17	□□□□□ -0.62
HMGN1-208	ENST00000443046	S1PR3	Q99500	378 aa		11.17	□□□□□ -0.62
HMGN1-208	ENST00000443046	CHCHD6	Q9BRQ6	235 aa		11.17	□□□□□ -0.62
HMGN1-208	ENST00000443046	GNB4	Q9HAV0	340 aa		11.17	□□□□□ -0.62
HMGN1-208	ENST00000443046	H2AFY2	Q9P0M6	372 aa	Predicted RBP	11.17	□□□□□ -0.62
HMGN1-208	ENST00000443046	KIF25	Q9UIL4	384 aa		11.17	□□□□□ -0.62
HMGN1-208	ENST00000443046	MEIKIN	A0A087WXM9	373 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	IGHV3-72	A0A0B4J1Y9	119 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	TRAV24	A0A0B4J272	114 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	TRIM64C	A6NLI5	447 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046		M0R129	80 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	OR2T7	P0C7T2	308 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	GP9	P14770	177 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	CD1B	P29016	333 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	GNG10	P50151	68 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	ZNF616	Q08AN1	781 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	BNIP1	Q12981	228 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	FAHD1	Q6P587	224 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	LINC00311	Q8N616	119 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	TCEANC	Q8N8B7	351 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	OR10X1	Q8NGY0	326 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	RFESD	Q8TAC1	157 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	DCUN1D4	Q92564	292 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	ST6GALNAC6	Q969X2	333 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	FGGY	Q96C11	551 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	ISOC1	Q96CN7	298 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	KCTD7	Q96MP8	289 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	SPACA5	Q96QH8	159 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	MBOAT4	Q96T53	435 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	TBX5	Q99593	518 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	KLK15	Q9H2R5	256 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046	ISYNA1	Q9NPH2	558 aa		11.16	□□□□□ -0.62
HMGN1-208	ENST00000443046		A0A1W2PPE3	182 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046		A8MZ25	164 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046		B2RBV5	119 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	LDLRAD4	O15165	306 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	IGLV1-40	P01703	118 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	ISG15	P05161	165 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	VDAC1	P21796	283 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	SSTR5	P35346	364 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	REG1B	P48304	166 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	GNB1	P62873	340 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	TMEM244	Q5VVB8	128 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	C8orf31	Q8N9H6	132 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	OR8H1	Q8NGG4	311 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	OR5D18	Q8NGL1	313 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	RASL11B	Q9BPW5	248 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	VSIG4	Q9Y279	399 aa		11.15	□□□□□ -0.62
HMGN1-208	ENST00000443046	AQP12B	A6NM10	295 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046		H0YJX3	145 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	OVOL1	O14753	267 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	MOS	P00540	346 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	HOXB6	P17509	224 aa	Known RBP	11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	EPHA2	P29317	976 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	SOX6	P35712	828 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	DAP	P51397	102 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	F2RL1	P55085	397 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	ZP1	P60852	638 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	LTC4S	Q16873	150 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	C12orf73	Q69YU5	71 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	ELP2	Q6IA86	826 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	GID4	Q8IVV7	300 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	AQP12A	Q8IXF9	295 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	CNIH3	Q8TBE1	160 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	PLPPR1	Q8TBJ4	325 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	MRGPRD	Q8TDS7	321 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	NRBF2	Q96F24	287 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	LRGUK	Q96M69	825 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	PRRG3	Q9BZD7	231 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	BARHL1	Q9BZE3	327 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	FAM107B	Q9H098	131 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	C19orf73	Q9NVV2	129 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	WARS2	Q9UGM6	360 aa	Known RBP	11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	MYRF	Q9Y2G1	1151 aa		11.14	□□□□□ -0.63
HMGN1-208	ENST00000443046	MAGEA13P	A6NCF6	341 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	FAM90A10P	A6NDY2	464 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	ZAR1L	A6NP61	321 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	ZNF736	B4DX44	427 aa	Predicted RBP	11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	SAP30	O75446	220 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	APOL3	O95236	402 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	OR5H8	P0DN80	308 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	ZNF20	P17024	532 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	VHL	P40337	213 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	MTNR1B	P49286	362 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	PAN3	Q58A45	887 aa	Known RBP	11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	FDX2	Q6P4F2	183 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046		Q8N1Y9	231 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	OR2G2	Q8NGZ5	317 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	DLX4	Q92988	240 aa	Predicted RBP	11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	IL4I1	Q96RQ9	567 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	TPSG1	Q9NRR2	321 aa		11.13	□□□□□ -0.63
HMGN1-208	ENST00000443046	FRRS1L	Q9P0K9	344 aa		11.13	□□□□□ -0.63

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