RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 NEK7Q8TDX7 302 aa9.39□□□□□ -0.91
TTC28-203ENST00000442232 JAM3Q9BX67 310 aa9.39□□□□□ -0.91
TTC28-203ENST00000442232 DNAH3Q8TD57 4116 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 TRAV24A0A0B4J272 114 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 SH2D7A6NKC9 451 aaPredicted RBP9.38□□□□□ -0.91
TTC28-203ENST00000442232 E9PI62 339 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 E9PQ18 207 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 LY6LH3BQJ8 138 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 OR7C1O76099 320 aaPredicted RBP9.38□□□□□ -0.91
TTC28-203ENST00000442232 IGHV3-7P01780 117 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 MYL12AP19105 171 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 IL3RAP26951 378 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 SLC35B1P78383 322 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 CCDC58Q4VC31 144 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 DDI2Q5TDH0 399 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 SLC16A12Q6ZSM3 486 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 LINC00596Q86U02 117 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 OR8H3Q8N146 312 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 DRAM1Q8N682 238 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 OR51A2Q8NGJ7 313 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 RFESDQ8TAC1 157 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 CHPT1Q8WUD6 406 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 LEAP2Q969E1 77 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 TMEM106AQ96A25 262 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 ZNF649Q9BS31 505 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 DPCDQ9BVM2 203 aaPredicted RBP9.38□□□□□ -0.91
TTC28-203ENST00000442232 RAB9BQ9NP90 201 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 CHCHD3Q9NX63 227 aaKnown RBP9.38□□□□□ -0.91
TTC28-203ENST00000442232 CKLFQ9UBR5 152 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 ING4Q9UNL4 249 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 ST3GAL6Q9Y274 331 aa9.38□□□□□ -0.91
TTC28-203ENST00000442232 TMEM30CPA0ZSE6 113 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 SERPINE3A8MV23 424 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 NUDT19A8MXV4 375 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 ZNF780AO75290 641 aaPredicted RBP9.37□□□□□ -0.91
TTC28-203ENST00000442232 MPIG6BO95866 241 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 SERPINA2P20848 420 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 DCKP27707 260 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 BDKRB2P30411 391 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 SSTR5P35346 364 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 ZNF93P35789 620 aaPredicted RBP9.37□□□□□ -0.91
TTC28-203ENST00000442232 GTF2A1P52655 376 aaPredicted RBP9.37□□□□□ -0.91
TTC28-203ENST00000442232 RBM11P57052 281 aaKnown RBP9.37□□□□□ -0.91
TTC28-203ENST00000442232 PAX5Q02548 391 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 RSBN1Q5VWQ0 802 aaPredicted RBP9.37□□□□□ -0.91
TTC28-203ENST00000442232 FOXRED2Q8IWF2 684 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 PQLC1Q8N2U9 271 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 STX19Q8N4C7 294 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 SUMF2Q8NBJ7 301 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 WFDC9Q8NEX5 89 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 OR52N1Q8NH53 320 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 PLPPR1Q8TBJ4 325 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 S100A14Q9HCY8 104 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 TMEM138Q9NPI0 162 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 MRPS18AQ9NVS2 196 aaKnown RBP9.37□□□□□ -0.91
TTC28-203ENST00000442232 IL36GQ9NZH8 169 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 PSG11Q9UQ72 335 aa9.37□□□□□ -0.91
TTC28-203ENST00000442232 A0A1W2PPI3 338 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 CCRL2O00421 344 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 HSD17B6O14756 317 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 FGF16O43320 207 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 CDRT1O95170 752 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 BAG2O95816 211 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 IGKV1D-33P01593 117 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 IGKV1-33P01594 117 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 LIMS3P0CW19 117 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 LIMS4P0CW20 117 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 CGB3P0DN86 165 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 CGB7P0DN87 165 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 GZMHP20718 246 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 RIPK1Q13546 671 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 GPR176Q14439 515 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 TCTEX1D4Q5JR98 221 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 ATAD3CQ5T2N8 411 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 ZNF529Q6P280 563 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 SLC35E3Q7Z769 313 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 RGP1Q92546 391 aaPredicted RBP9.36□□□□□ -0.91
TTC28-203ENST00000442232 SMIM19Q96E16 107 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 RDH12Q96NR8 316 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 SLC29A1Q99808 456 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 IFT22Q9H7X7 185 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 LINC00574Q9H8X3 128 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 FGF20Q9NP95 211 aaPredicted RBP9.36□□□□□ -0.91
TTC28-203ENST00000442232 SMPD3Q9NY59 655 aaPredicted RBP9.36□□□□□ -0.91
TTC28-203ENST00000442232 ZNF281Q9Y2X9 895 aa9.36□□□□□ -0.91
TTC28-203ENST00000442232 EXOSC1Q9Y3B2 195 aaKnown RBP9.36□□□□□ -0.91
TTC28-203ENST00000442232 FAM90A18PA6NE21 464 aa9.35□□□□□ -0.91
TTC28-203ENST00000442232 FAM90A16PA6NEW6 464 aa9.35□□□□□ -0.91
TTC28-203ENST00000442232 FAM90A20PA6NIJ5 464 aa9.35□□□□□ -0.91
TTC28-203ENST00000442232 FAM90A9PA6NNJ1 464 aa9.35□□□□□ -0.91
TTC28-203ENST00000442232 FAM90A12PA8MX19 464 aa9.35□□□□□ -0.91
TTC28-203ENST00000442232 FAM90A5PA8MXJ8 464 aa9.35□□□□□ -0.91
TTC28-203ENST00000442232 NPIPB11E5RHQ5 1161 aa9.35□□□□□ -0.91
TTC28-203ENST00000442232 SDCBPO00560 298 aaPredicted RBP9.35□□□□□ -0.91
TTC28-203ENST00000442232 GAPDHP04406 335 aaKnown RBP9.35□□□□□ -0.91
TTC28-203ENST00000442232 AMY1AP04745 511 aa9.35□□□□□ -0.91
TTC28-203ENST00000442232 AMY2AP04746 511 aa9.35□□□□□ -0.91
TTC28-203ENST00000442232 FAM90A15PP0C7V4 464 aa9.35□□□□□ -0.91
TTC28-203ENST00000442232 FAM90A13PP0C7W8 464 aa9.35□□□□□ -0.91
TTC28-203ENST00000442232 FAM90A14PP0C7W9 464 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms