RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 CXorf66Q5JRM2 361 aaPredicted RBP14.16□□□□□ -0.14
SEMA3B-207ENST00000441915 C9orf152Q5JTZ5 239 aa14.16□□□□□ -0.14
SEMA3B-207ENST00000441915 SLC23A3Q6PIS1 610 aa14.16□□□□□ -0.14
SEMA3B-207ENST00000441915 MRPL21Q7Z2W9 205 aaKnown RBP14.16□□□□□ -0.14
SEMA3B-207ENST00000441915 STX12Q86Y82 276 aa14.16□□□□□ -0.14
SEMA3B-207ENST00000441915 ZFP62Q8NB50 900 aaPredicted RBP14.16□□□□□ -0.14
SEMA3B-207ENST00000441915 SUMF2Q8NBJ7 301 aa14.16□□□□□ -0.14
SEMA3B-207ENST00000441915 OR5C1Q8NGR4 320 aa14.16□□□□□ -0.14
SEMA3B-207ENST00000441915 MAGT1Q9H0U3 335 aa14.16□□□□□ -0.14
SEMA3B-207ENST00000441915 A0A096LPE4 126 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 A0A1W2PPE3 182 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 A0A1W2PPZ6 126 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 PINLYPA6NC86 204 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 SLC22A20A6NK97 555 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 ZNF724A8MTY0 619 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 CLN5O75503 358 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 CER1O95813 267 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 RAB1AP62820 205 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 MPV17LQ2QL34 196 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 CEACAM21Q3KPI0 293 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 DCAF12Q5T6F0 453 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 C9orf135Q5VTT2 229 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 C5orf24Q7Z6I8 188 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 ZDHHC23Q8IYP9 409 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 CMTM1Q8IZ96 169 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 FAM24BQ8N5W8 94 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 TMEM171Q8WVE6 324 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 TCTEX1D2Q8WW35 142 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 GTF3AQ92664 365 aaKnown RBP14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 UFSP2Q9NUQ7 469 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 C5orf49A4QMS7 147 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 TRAPPC2LH3BP13 241 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 HSPB6O14558 160 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 ARG1P05089 322 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 CTXN2P0C2S0 81 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 RD3LP0DJH9 198 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 CCL2P13500 99 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 DEFA6Q01524 100 aa14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 BOKQ9UMX3 212 aaPredicted RBP14.15□□□□□ -0.14
SEMA3B-207ENST00000441915 IGKV1D-13A0A0B4J2D9 117 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 CLEC18AA5D8T8 446 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 PROB1E7EW31 1015 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 HSD17B6O14756 317 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 IGKV1-13P0DP09 117 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 UCP1P25874 307 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 EIF2S3P41091 472 aaKnown RBP14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 SSPNQ14714 243 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 HERPUD1Q15011 391 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 CLEC18CQ8NCF0 446 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 OR8G5Q8NG78 346 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 GPHA2Q96T91 129 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 RARRES2Q99969 163 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 LINC00470Q9BZP3 86 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 MTCH1Q9NZJ7 389 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 ATP23Q9Y6H3 246 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 IGKV3D-15A0A087WSY6 115 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 B4E171 279 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 SERPINA7P05543 415 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 ITGA3P26006 1051 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 TSPAN7P41732 249 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 SRYQ05066 204 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 NMSQ5H8A3 153 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 ADAM5Q6NVV9 412 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 MKXQ8IYA7 352 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 HS3ST6Q96QI5 342 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 FGF23Q9GZV9 251 aaPredicted RBP14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 UNKLQ9H9P5 680 aaKnown RBP14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 PUS1Q9Y606 427 aaKnown RBP eCLIP14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 RFNGQ9Y644 331 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 FREM1Q5H8C1 2179 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 TMEM265A0A087WTH1 108 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 hCG_1809904A0A1W2PP81 198 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 A0A1W2PPE2 198 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 A0A1W2PR64 198 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 A0A1W2PRV1 198 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 BTBD17A6NE02 478 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 RBFOX3A6NFN3 312 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 CDRT15L2A8MXV6 281 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 ZNF732B4DXR9 585 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 TUSC2O75896 110 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 HLA-HP01893 362 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 ID3Q02535 119 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 BAXQ07812 192 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 SPINK14Q6IE38 97 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 IL22RA1Q8N6P7 574 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 APOBEC3DQ96AK3 386 aaPredicted RBP14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 GNPNAT1Q96EK6 184 aaPredicted RBP14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 CCL28Q9NRJ3 127 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 TREM2Q9NZC2 230 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 LRFN1Q9P244 771 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 IL36RNQ9UBH0 155 aa14.14□□□□□ -0.15
SEMA3B-207ENST00000441915 CST7O76096 145 aa14.13□□□□□ -0.15
SEMA3B-207ENST00000441915 MMP9P14780 707 aa14.13□□□□□ -0.15
SEMA3B-207ENST00000441915 TMEM217Q8N7C4 229 aa14.13□□□□□ -0.15
SEMA3B-207ENST00000441915 SIGLEC12Q96PQ1 595 aa14.13□□□□□ -0.15
SEMA3B-207ENST00000441915 HIST1H2AAQ96QV6 131 aa14.13□□□□□ -0.15
SEMA3B-207ENST00000441915 ABHD14AQ9BUJ0 271 aa14.13□□□□□ -0.15
SEMA3B-207ENST00000441915 GLRX2Q9NS18 164 aa14.13□□□□□ -0.15
SEMA3B-207ENST00000441915 IGHV2-5P01817 119 aa14.13□□□□□ -0.15
SEMA3B-207ENST00000441915 DYNLT3P51808 116 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms