RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 BCL3P20749 454 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 SERPINA2P20848 420 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 CD200P41217 278 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 HAAOP46952 286 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 NPBWR2P48146 333 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 RBP2P50120 134 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF81P51508 661 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 SCAND1P57086 179 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 RPL15P61313 204 aaKnown RBP3.93□□□□□ -1.78
PTPN4-206ENST00000441089 GNG3P63215 75 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 IFITM3Q01628 133 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 IL24Q13007 206 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 PDZK1IP1Q13113 114 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 DCTN2Q13561 401 aaKnown RBP3.93□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF79Q15937 498 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 MOGQ16653 247 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 MOGAT2Q3SYC2 334 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 DEFB121Q5J5C9 76 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 AWAT2Q6E213 333 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 MZT2AQ6P582 158 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 CNIH2Q6PI25 160 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 HAGHLQ6PII5 290 aaPredicted RBP3.93□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF826PQ6ZT77 177 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 OR2W3Q7Z3T1 314 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 SNX29P2Q8IUI4 249 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 LYSMD2Q8IV50 215 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 ZCCHC24Q8N2G6 241 aaKnown RBP3.93□□□□□ -1.78
PTPN4-206ENST00000441089 SCCPDHQ8NBX0 429 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 Q8NFD4 153 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 PXT1Q8NFP0 134 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 OR2Z1Q8NG97 314 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 OR13G1Q8NGZ3 307 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 OR8S1Q8NH09 359 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF671Q8TAW3 534 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 ITLN1Q8WWA0 313 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 AQP3Q92482 292 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 TAF15Q92804 592 aaKnown RBP eCLIP3.93□□□□□ -1.78
PTPN4-206ENST00000441089 FAM46BQ96A09 425 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 SLAMF9Q96A28 289 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 ELMOD3Q96FG2 381 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 HIST1H2AAQ96QV6 131 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 GPER1Q99527 375 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 MICU1Q9BPX6 476 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 MLST8Q9BVC4 326 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 RTL8AQ9BWD3 113 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 PKIBQ9C010 78 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 SRRQ9GZT4 340 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 METTL9Q9H1A3 318 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 LPAR5Q9H1C0 372 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 TLNRD1Q9H1K6 362 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 ABCG5Q9H222 651 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 CYSLTR2Q9NS75 346 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 RBFOX1Q9NWB1 397 aaKnown RBP3.93□□□□□ -1.78
PTPN4-206ENST00000441089 RHBDL2Q9NX52 303 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 DCAF16Q9NXF7 216 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 IL36GQ9NZH8 169 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 MTCH1Q9NZJ7 389 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 IL36RNQ9UBH0 155 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 EXTL2Q9UBQ6 330 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF69Q9UC07 566 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 SLC7A11Q9UPY5 501 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 PEX16Q9Y5Y5 336 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 U3KQK5 164 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 FRAS1Q86XX4 4008 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 TMEM210A6NLX4 147 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 C17orf100A8MU93 164 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 CLDN25C9JDP6 229 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 RAB27BO00194 218 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 WNT9BO14905 357 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 SOCS1O15524 211 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 CRTAPO75718 401 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-206ENST00000441089 SCAF4O95104 1147 aaKnown RBP3.92□□□□□ -1.78
PTPN4-206ENST00000441089 HLA-DQB1P01920 261 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 APOA1P02647 267 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 TFF1P04155 84 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 CD55P08174 381 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 OCMP0CE72 109 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-206ENST00000441089 PGA5P0DJD9 388 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 MGMTP16455 207 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 CDK2P24941 298 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 TAS2R20P59543 309 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 KRTAP10-3P60369 221 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 ERVK11-1P61568 191 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 RPS27AP62979 156 aaKnown RBP3.92□□□□□ -1.78
PTPN4-206ENST00000441089 TNFAIP6P98066 277 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-206ENST00000441089 PIGYQ3MUY2 71 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 SLC22A6Q4U2R8 563 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 C19orf54Q5BKX5 351 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 PLAC9Q5JTB6 97 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 UBE2NLQ5JXB2 153 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 SIGIRRQ6IA17 410 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 WDR82Q6UXN9 313 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 LINC00299Q6ZSB3 139 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 LRRC28Q86X40 367 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF573Q86YE8 665 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 SAXO1Q8IYX7 474 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 FTMTQ8N4E7 242 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 PNLDC1Q8NA58 520 aaKnown RBP3.92□□□□□ -1.78
PTPN4-206ENST00000441089 ZSCAN4Q8NAM6 433 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-206ENST00000441089 POC1AQ8NBT0 407 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms