RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 IL1AP01583 271 aa15.95■□□□□ 0.14
SHROOM1-204ENST00000440118 CD24P25063 80 aa15.95■□□□□ 0.14
SHROOM1-204ENST00000440118 C17orf58Q2M2W7 97 aa15.95■□□□□ 0.14
SHROOM1-204ENST00000440118 TPTE2P1Q5T6R2 138 aa15.95■□□□□ 0.14
SHROOM1-204ENST00000440118 HIST2H2BDQ6DRA6 164 aa15.95■□□□□ 0.14
SHROOM1-204ENST00000440118 C16orf82Q7Z2V1 217 aa15.95■□□□□ 0.14
SHROOM1-204ENST00000440118 LINC00596Q86U02 117 aa15.95■□□□□ 0.14
SHROOM1-204ENST00000440118 SUMF2Q8NBJ7 301 aa15.95■□□□□ 0.14
SHROOM1-204ENST00000440118 TOMM40LQ969M1 308 aa15.95■□□□□ 0.14
SHROOM1-204ENST00000440118 KIRREL1Q96J84 757 aa15.95■□□□□ 0.14
SHROOM1-204ENST00000440118 IDI2-AS1Q9NZ38 188 aa15.95■□□□□ 0.14
SHROOM1-204ENST00000440118 TRBV5-5A0A0J9YX44 114 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 A0A1W2PPK0 400 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 TMEM30CPA0ZSE6 113 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 BUB1B-PAK6H3BSN5 160 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 GEMIN2O14893 280 aaKnown RBP15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 IGLV1-47P01700 117 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 IGHV3-7P01780 117 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 GTF2F2P13984 249 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 GNG10P50151 68 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 WNT4P56705 351 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 GPR176Q14439 515 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 NSUN5P1Q3KNT7 163 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 RSBN1Q5VWQ0 802 aaPredicted RBP15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 ASCL4Q6XD76 172 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 Q8N2B8 174 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 PLPPR1Q8TBJ4 325 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 SLC25A33Q9BSK2 321 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 MMP28Q9H239 520 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 SERTAD4Q9NUC0 356 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 ERGIC3Q9Y282 383 aa15.94■□□□□ 0.14
SHROOM1-204ENST00000440118 A0A087X0M5 115 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 A0A1B0GX30 115 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 MAGEA13PA6NCF6 341 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 CASQ2O14958 399 aaPredicted RBP15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 CELP19835 753 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 FSTP19883 344 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 SSTR5P35346 364 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 BLCAPP62952 87 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 MPV17LQ2QL34 196 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 TMEM95Q3KNT9 176 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 AWAT2Q6E213 333 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 LYG1Q8N1E2 194 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 RFESDQ8TAC1 157 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 CFHR4Q92496 578 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 THRSPQ92748 146 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 LEAP2Q969E1 77 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 MUL1Q969V5 352 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 PGLYRP3Q96LB9 341 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 NCOR1P1Q9H4R4 102 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 LIN7BQ9HAP6 207 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 PSORS1C1Q9UIG5 152 aa15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 MRPS28Q9Y2Q9 187 aaKnown RBP15.93■□□□□ 0.14
SHROOM1-204ENST00000440118 TRAV8-7A0A075B6U6 113 aa15.92■□□□□ 0.14
SHROOM1-204ENST00000440118 TRAV39A0A0B4J263 110 aa15.92■□□□□ 0.14
SHROOM1-204ENST00000440118 FAM90A22PA8MWA6 464 aa15.92■□□□□ 0.14
SHROOM1-204ENST00000440118 OOSP1A8MZH6 123 aa15.92■□□□□ 0.14
SHROOM1-204ENST00000440118 MAS1P04201 325 aa15.92■□□□□ 0.14
SHROOM1-204ENST00000440118 IGFBP3P17936 291 aaPredicted RBP15.92■□□□□ 0.14
SHROOM1-204ENST00000440118 MAPK3P27361 379 aaPredicted RBP15.92■□□□□ 0.14
SHROOM1-204ENST00000440118 NHLRC3Q5JS37 347 aa15.92■□□□□ 0.14
SHROOM1-204ENST00000440118 C1QL4Q86Z23 238 aa15.92■□□□□ 0.14
SHROOM1-204ENST00000440118 Q8NFD4 153 aa15.92■□□□□ 0.14
SHROOM1-204ENST00000440118 OR10X1Q8NGY0 326 aa15.92■□□□□ 0.14
SHROOM1-204ENST00000440118 OR2F2O95006 317 aa15.91■□□□□ 0.14
SHROOM1-204ENST00000440118 CD28P10747 220 aa15.91■□□□□ 0.14
SHROOM1-204ENST00000440118 MADCAM1Q13477 382 aa15.91■□□□□ 0.14
SHROOM1-204ENST00000440118 PDLIM3Q53GG5 364 aaPredicted RBP15.91■□□□□ 0.14
SHROOM1-204ENST00000440118 GLIPR1L1Q6UWM5 242 aa15.91■□□□□ 0.14
SHROOM1-204ENST00000440118 IFT22Q9H7X7 185 aa15.91■□□□□ 0.14
SHROOM1-204ENST00000440118 SPACA1Q9HBV2 294 aa15.91■□□□□ 0.14
SHROOM1-204ENST00000440118 ZNF581Q9P0T4 197 aa15.91■□□□□ 0.14
SHROOM1-204ENST00000440118 A0A1W2PP11 408 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 J3QR06 171 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 FAM106CPP0CH98 169 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 VHLP40337 213 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 RPS11P62280 158 aaKnown RBP eCLIP15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 PAX5Q02548 391 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 HES1Q14469 280 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 ABCA11PQ4W5N1 156 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 C9orf152Q5JTZ5 239 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 NKAIN3Q8N8D7 197 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 ZNF485Q8NCK3 441 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 OR10A7Q8NGE5 316 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 CCDC107Q8WV48 283 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 DERL3Q96Q80 235 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 MND1Q9BWT6 205 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 PLCXD1Q9NUJ7 323 aa15.9■□□□□ 0.14
SHROOM1-204ENST00000440118 TRBV5-7A0A0A0MS05 114 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 MCRIP1C9JLW8 97 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 AIPO00170 330 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 GPX5O75715 221 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 DOC2BQ14184 412 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 UTF1Q5T230 341 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 Q6ZS46 218 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 OR4F17Q8NGA8 305 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 OR56B4Q8NH76 319 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 RBM14Q96PK6 669 aaKnown RBP15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 OR4F4Q96R69 305 aa15.89■□□□□ 0.13
SHROOM1-204ENST00000440118 SCN3BQ9NY72 215 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms