RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 CST11Q9H112 138 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 IDI2-AS1Q9NZ38 188 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 DPM3Q9P2X0 92 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 KIF25Q9UIL4 384 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 LSM2Q9Y333 95 aaKnown RBP8.49□□□□□ -1.05
MCF2L-216ENST00000439475 RNF114Q9Y508 228 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 A0A1W2PP11 408 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 TMEM30CPA0ZSE6 113 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A10PA6NDY2 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A18PA6NE21 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A16PA6NEW6 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A20PA6NIJ5 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A7PA6NKC0 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 VGLL3A8MV65 326 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A22PA8MWA6 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A12PA8MX19 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A5PA8MXJ8 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A23PA8MXZ1 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 CRTAPO75718 401 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-216ENST00000439475 TSPAN9O75954 239 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 GLAP06280 429 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A15PP0C7V4 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A13PP0C7W8 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A14PP0C7W9 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A24PP0C7X0 464 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 CPEP16870 476 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 NFYBP25208 207 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 CD34P28906 385 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 PSMD7P51665 324 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 DYNLT3P51808 116 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 PRAMEF5Q5TYX0 476 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 RSBN1Q5VWQ0 802 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-216ENST00000439475 SLC16A12Q6ZSM3 486 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 Q6ZSV7 163 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 SVOPQ8N4V2 548 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 OR9G1Q8NH87 305 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 LINC01006Q8NI28 216 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 SGCDQ92629 289 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 YTHDF1Q9BYJ9 559 aaKnown RBP8.48□□□□□ -1.05
MCF2L-216ENST00000439475 SELENOIQ9C0D9 397 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 NPFFR1Q9GZQ6 430 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 PPIL3Q9H2H8 161 aaKnown RBP8.48□□□□□ -1.05
MCF2L-216ENST00000439475 C16orf95Q9H693 158 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 CALYQ9NYX4 217 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 AMMECR1Q9Y4X0 333 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-216ENST00000439475 HILPDAQ9Y5L2 63 aa8.48□□□□□ -1.05
MCF2L-216ENST00000439475 A0A087X0M5 115 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 A0A1B0GX30 115 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 MAGEA13PA6NCF6 341 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 OOSP1A8MZH6 123 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 F2RL2O00254 374 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 CA11O75493 328 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 MMP23AO75900 390 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 IL1AP01583 271 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 UCHL1P09936 223 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 CGB3P0DN86 165 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 CGB7P0DN87 165 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 MGMTP16455 207 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 MNDAP41218 407 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 KIR2DS4P43632 304 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 GABARAPL2P60520 117 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 RELBQ01201 579 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 TBCEQ15813 527 aaPredicted RBP8.47□□□□□ -1.05
MCF2L-216ENST00000439475 C17orf58Q2M2W7 97 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 PLA1AQ53H76 456 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 CCDC144NLQ6NUI1 221 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 C11orf88Q6PI97 169 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 ZNF367Q7RTV3 350 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 OR4C13Q8NGP0 309 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 OR13A1Q8NGR1 328 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 OR2T6Q8NHC8 308 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 PLPPR1Q8TBJ4 325 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 MRGPRDQ8TDS7 321 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 CAPSLQ8WWF8 208 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 TAF15Q92804 592 aaKnown RBP eCLIP8.47□□□□□ -1.05
MCF2L-216ENST00000439475 TMEM203Q969S6 136 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 AJUBAQ96IF1 538 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 BANF2Q9H503 90 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 RANBP3Q9H6Z4 567 aaPredicted RBP8.47□□□□□ -1.05
MCF2L-216ENST00000439475 ACOT13Q9NPJ3 140 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 ETAA1Q9NY74 926 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 FBLN5Q9UBX5 448 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 TRAPPC2LQ9UL33 140 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 TCF19Q9Y242 345 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 PEX16Q9Y5Y5 336 aa8.47□□□□□ -1.05
MCF2L-216ENST00000439475 MXRA5Q9NR99 2828 aa8.46□□□□□ -1.05
MCF2L-216ENST00000439475 NPIPB11E5RHQ5 1161 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 BUB1B-PAK6H3BSN5 160 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 AIPO00170 330 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 TIMM23O14925 209 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 DENRO43583 198 aaKnown RBP8.46□□□□□ -1.06
MCF2L-216ENST00000439475 ORC5O43913 435 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 SC5DO75845 299 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 BPNT1O95861 308 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 MPIG6BO95866 241 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 MT-ND4P03905 459 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 FUT3P21217 361 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 HTR2CP28335 458 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 GABRA5P31644 462 aa8.46□□□□□ -1.06
MCF2L-216ENST00000439475 MAP2K4P45985 399 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms