RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 FAM192AQ9GZU8 254 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 ORC6Q9Y5N6 252 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 GMPPBQ9Y5P6 360 aa14.36□□□□□ -0.11
GTF3A-204ENST00000438571 LINC01548A6NM66 108 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 TMEM212A6NML5 194 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 NPIPB11E5RHQ5 1161 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 ATP5HO75947 161 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 IGKV1D-33P01593 117 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 IGKV1-33P01594 117 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 CCDC159P0C7I6 412 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 FAM106CPP0CH98 169 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 TMEM11P17152 192 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 THBS3P49746 956 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 RPL23AP62750 156 aaKnown RBP14.35□□□□□ -0.11
GTF3A-204ENST00000438571 EGFEM1PQ0D2K5 195 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 IL13RA2Q14627 380 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 VAX1Q5SQQ9 334 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 ZNF529Q6P280 563 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 OR52I1Q8NGK6 324 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 OR5D14Q8NGL3 314 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 DUX3Q96PT4 197 aa14.35□□□□□ -0.11
GTF3A-204ENST00000438571 AMMECR1Q9Y4X0 333 aaPredicted RBP14.35□□□□□ -0.11
GTF3A-204ENST00000438571 IGHV3-72A0A0B4J1Y9 119 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 M0QZK8 103 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 CDRT1O95170 752 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 REG1BP48304 166 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 DEFB121Q5J5C9 76 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 OR2W3Q7Z3T1 314 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 THNSL2Q86YJ6 484 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 APH1BQ8WW43 257 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 ORAI1Q96D31 301 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 GPER1Q99527 375 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 JAM3Q9BX67 310 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 LINC00574Q9H8X3 128 aa14.34□□□□□ -0.11
GTF3A-204ENST00000438571 HTR3BO95264 441 aa14.33□□□□□ -0.12
GTF3A-204ENST00000438571 CLIC3O95833 236 aa14.33□□□□□ -0.12
GTF3A-204ENST00000438571 RAB3AP20336 220 aa14.33□□□□□ -0.12
GTF3A-204ENST00000438571 C21orf33P30042 268 aaPredicted RBP14.33□□□□□ -0.12
GTF3A-204ENST00000438571 MADCAM1Q13477 382 aa14.33□□□□□ -0.12
GTF3A-204ENST00000438571 SUMF2Q8NBJ7 301 aa14.33□□□□□ -0.12
GTF3A-204ENST00000438571 CYYR1Q96J86 154 aa14.33□□□□□ -0.12
GTF3A-204ENST00000438571 SLC29A1Q99808 456 aa14.33□□□□□ -0.12
GTF3A-204ENST00000438571 A0A1W2PP11 408 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 HSD17B6O14756 317 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 DUS4LO95620 317 aaKnown RBP14.32□□□□□ -0.12
GTF3A-204ENST00000438571 LIMS3P0CW19 117 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 LIMS4P0CW20 117 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 SMN1Q16637 294 aaKnown RBP14.32□□□□□ -0.12
GTF3A-204ENST00000438571 ZNF565Q8N9K5 539 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 KLHL30-AS1Q8NEE0 82 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 Q8NFD4 153 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 OR13C5Q8NGS8 318 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 RHOXF1Q8NHV9 184 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 DPCDQ9BVM2 203 aaPredicted RBP14.32□□□□□ -0.12
GTF3A-204ENST00000438571 BARHL1Q9BZE3 327 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 NCOR1P1Q9H4R4 102 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 PCDHB16Q9NRJ7 776 aa14.32□□□□□ -0.12
GTF3A-204ENST00000438571 IGHV3-43A0A0B4J1X8 118 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 SNTNA6NMZ2 147 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 SERPINE3A8MV23 424 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 FGF16O43320 207 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 FADS2O95864 444 aaKnown RBP14.31□□□□□ -0.12
GTF3A-204ENST00000438571 IGHG2P01859 326 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 IGHV3-43DP0DP04 118 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 RAB7AP51149 207 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 GBX2P52951 348 aaPredicted RBP14.31□□□□□ -0.12
GTF3A-204ENST00000438571 PAX5Q02548 391 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 RSU1Q15404 277 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 ASCL4Q6XD76 172 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 LCNL1Q6ZST4 164 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 SLC35E3Q7Z769 313 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 OR8H3Q8N146 312 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 OR10X1Q8NGY0 326 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 CHPT1Q8WUD6 406 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 MRPL48Q96GC5 212 aaKnown RBP14.31□□□□□ -0.12
GTF3A-204ENST00000438571 P2RX4Q99571 388 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 ST3GAL6Q9Y274 331 aa14.31□□□□□ -0.12
GTF3A-204ENST00000438571 SIRT4Q9Y6E7 314 aaPredicted RBP14.31□□□□□ -0.12
GTF3A-204ENST00000438571 IGHV1-3A0A0C4DH29 117 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 MAGEA13PA6NCF6 341 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 NUDT19A8MXV4 375 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 C15orf65H3BRN8 121 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 GEMIN2O14893 280 aaKnown RBP14.3□□□□□ -0.12
GTF3A-204ENST00000438571 OR7C1O76099 320 aaPredicted RBP14.3□□□□□ -0.12
GTF3A-204ENST00000438571 RPSAP08865 295 aaKnown RBP14.3□□□□□ -0.12
GTF3A-204ENST00000438571 SERPINA2P20848 420 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 ZNF816Q0VGE8 651 aaPredicted RBP14.3□□□□□ -0.12
GTF3A-204ENST00000438571 RAB40BQ12829 278 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 OR2G6Q5TZ20 316 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 MOB3BQ86TA1 216 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 STPG2Q8N412 459 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 OR51D1Q8NGF3 324 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 HAVCR2Q8TDQ0 301 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 EAF1Q96JC9 268 aaPredicted RBP14.3□□□□□ -0.12
GTF3A-204ENST00000438571 ING4Q9UNL4 249 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 NBEAL2Q6ZNJ1 2754 aa14.3□□□□□ -0.12
GTF3A-204ENST00000438571 SLC31A2O15432 143 aa14.29□□□□□ -0.12
GTF3A-204ENST00000438571 MAGEB3O15480 346 aa14.29□□□□□ -0.12
GTF3A-204ENST00000438571 LALBAP00709 142 aa14.29□□□□□ -0.12
GTF3A-204ENST00000438571 RBM11P57052 281 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms