RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 GALNT10Q86SR1 603 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 CALHM3Q86XJ0 350 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 C10orf107Q8IVU9 208 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 SELENOHQ8IZQ5 122 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 OTUD6BQ8N6M0 293 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 OR2Y1Q8NGV0 311 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 OR5P2Q8WZ92 322 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 YPEL4Q96NS1 127 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 SERPINB11Q96P15 392 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 CYTH2Q99418 400 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 SHANK2-AS3Q9BTD1 123 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 ULBP1Q9BZM6 244 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 ZNF436Q9C0F3 470 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 NCOA2Q15596 1464 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 NLRP1Q9C000 1473 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 ARHGAP35Q9NRY4 1499 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 SLIT2O94813 1529 aa1.89□□□□□ -2.11
TRAPPC13-204ENST00000438419 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 MARF1Q9Y4F3 1742 aaKnown RBP1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 MYOM2P54296 1465 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 GOLGA8IPA6NC78 632 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 IQCF5A8MTL0 148 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 RNASEK-C17orf49H0YIS7 233 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 POLR3GO15318 223 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 GYG2O15488 501 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 SLC37A4O43826 429 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 MYO1DO94832 1006 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 KCNK2O95069 426 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 SCGB1C2P0DMR2 95 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 PRTN3P24158 256 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 TTPAP49638 278 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 FMODQ06828 376 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 IGFBP7Q16270 282 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 TPGS1Q6ZTW0 290 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 C17orf78Q8N4C9 275 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 ZFP62Q8NB50 900 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 C1orf64Q8NEQ6 169 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 SCGB1C1Q8TD33 95 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 C2orf15Q8WU43 125 aaKnown RBP1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 TWIST2Q8WVJ9 160 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 LINC01587Q99440 93 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 ANGPTL4Q9BY76 406 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 LHX5Q9H2C1 402 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 OR52A5Q9H2C5 316 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 SPACA1Q9HBV2 294 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 FAM60AQ9NP50 221 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 GMEB1Q9Y692 573 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 ABCA3Q99758 1704 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 UGGT2Q9NYU1 1516 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 YLPM1P49750 1951 aaKnown RBP1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 NRCAMQ92823 1304 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 LAMB4A4D0S4 1761 aa1.88□□□□□ -2.11
TRAPPC13-204ENST00000438419 MIA2Q96PC5 1412 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 VCANP13611 3396 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 MLH3Q9UHC1 1453 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 CHD6Q8TD26 2715 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 A0A1B0GXF2 115 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 CDIPTO14735 213 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 FFAR1O14842 300 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 SGCEO43556 437 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 TNFAIP8O95379 198 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 SOD3P08294 240 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 CECR9P0C854 216 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 SYT1P21579 422 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 RPA3P35244 121 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 MAGEA6P43360 314 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 LGALS7P47929 136 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 GCLMP48507 274 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 AQP5P55064 265 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 FLI1Q01543 452 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 TPBGQ13641 420 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 BSXQ3C1V8 233 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 CEACAM21Q3KPI0 293 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 NXNL2Q5VZ03 156 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 ZNF470Q6ECI4 717 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 LRRC6Q86X45 466 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 OR8S1Q8NH09 359 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 ANGPTL6Q8NI99 470 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 CCL17Q92583 94 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 GTF2H4Q92759 462 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 PITX2Q99697 317 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 BBS2Q9BXC9 721 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 PLA2G12AQ9BZM1 189 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 CHMP4BQ9H444 224 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 NRBP2Q9NSY0 501 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 MS4A12Q9NXJ0 267 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 CD300AQ9UGN4 299 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 C14orf166Q9Y224 244 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 SNX24Q9Y343 169 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 USH1CQ9Y6N9 552 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 EPG5Q9HCE0 2579 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 PREX2Q70Z35 1606 aa1.87□□□□□ -2.11
TRAPPC13-204ENST00000438419 FLNBO75369 2602 aaKnown RBP1.86□□□□□ -2.11
TRAPPC13-204ENST00000438419 NEXMIFQ5QGS0 1516 aa1.86□□□□□ -2.11
TRAPPC13-204ENST00000438419 CEP290O15078 2479 aa1.86□□□□□ -2.11
TRAPPC13-204ENST00000438419 PGPA6NDG6 321 aa1.86□□□□□ -2.11
TRAPPC13-204ENST00000438419 CD300LBA8K4G0 201 aa1.86□□□□□ -2.11
TRAPPC13-204ENST00000438419 K7EPK0 472 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms