RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 A0A0G2JMZ2 1700 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 LRRC37A2A6NM11 1700 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 ERVFRD-1P60508 538 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 KRTDAPP60985 99 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 CLLU1Q5K131 121 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 SLC26A10Q8NG04 563 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 IFI6P09912 130 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 HOXA4Q00056 320 aaPredicted RBP13.91□□□□□ -0.18
PTPN13-204ENST00000436978 SPINK9Q5DT21 86 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 TEX50A0A1B0GTY4 177 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 NQO2P16083 231 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 HLXQ14774 488 aaPredicted RBP13.91□□□□□ -0.18
PTPN13-204ENST00000436978 ID1P41134 155 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 ETFDHQ16134 617 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 Q1RN00 199 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 SLC25A22Q9H936 323 aa13.91□□□□□ -0.18
PTPN13-204ENST00000436978 A0A1B0GU03 582 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 MOSPD3O75425 235 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 HSBP1O75506 76 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 Q8WTZ3 238 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 A0A1B0GTH9 108 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 PATE3B3GLJ2 98 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 TCAPO15273 167 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 DAOP14920 347 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 RAB32Q13637 225 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 FAM219AQ8IW50 185 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 PRR33A8MZF0 331 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 RNF212Q495C1 297 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 PILRBQ9UKJ0 227 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 WSB1Q9Y6I7 421 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 DOCK6Q96HP0 2047 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 UBE2L3P68036 154 aaKnown RBP13.9□□□□□ -0.18
PTPN13-204ENST00000436978 ZNF596Q8TC21 504 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 TOX4O94842 621 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 ERGP11308 486 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 LURAP1Q96LR2 239 aa13.9□□□□□ -0.18
PTPN13-204ENST00000436978 PRSS23O95084 383 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 VAMP8Q9BV40 100 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 NIT2Q9NQR4 276 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 DUXBA0A1W2PPF3 345 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 RPL36A-HNRNPH2H7BZ11 118 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 PPYP01298 95 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 IQCJQ1A5X6 159 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 STXBP6Q8NFX7 210 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 PTX4Q96A99 478 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 HARBI1Q96MB7 349 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 UCN2Q96RP3 112 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 ASCL3Q9NQ33 180 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 ZDHHC8Q9ULC8 765 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 ARID1AO14497 2285 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 FAM209AQ5JX71 171 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 TNFRSF19Q9NS68 423 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 CCL27Q9Y4X3 112 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 ARHGEF17Q96PE2 2063 aaPredicted RBP13.89□□□□□ -0.19
PTPN13-204ENST00000436978 ICE1Q9Y2F5 2266 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 RPL30P62888 115 aaKnown RBP13.89□□□□□ -0.19
PTPN13-204ENST00000436978 TREM2Q9NZC2 230 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 FOXS1O43638 330 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 HTR1DP28221 377 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 SLC23A3Q6PIS1 610 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 DPPA3Q6W0C5 159 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 SLC7A10Q9NS82 523 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 DOK5Q9P104 306 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 PNRC1Q12796 327 aaPredicted RBP13.89□□□□□ -0.19
PTPN13-204ENST00000436978 NAT8BQ9UHF3 227 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 TINAGQ9UJW2 476 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 ESPL1Q14674 2120 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 TMUB1Q9BVT8 246 aa13.89□□□□□ -0.19
PTPN13-204ENST00000436978 RAB29O14966 203 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 GYPAP02724 150 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 VDAC1P21796 283 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 SHISA5Q8N114 240 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 GVQW1Q8N7I0 195 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 LILRB1Q8NHL6 650 aaPredicted RBP13.88□□□□□ -0.19
PTPN13-204ENST00000436978 SYNGR1O43759 233 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 SYNGR2O43760 224 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 PDE6DO43924 150 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 TXNDC12O95881 172 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 SLC6A1P30531 599 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 FAM74A3Q4VXF1 159 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 CLEC5AQ9NY25 188 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 IGSF23A1L1A6 192 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 FAM157AC9JC47 383 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 K7N7A8 449 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 LSM11P83369 360 aaKnown RBP eCLIP13.88□□□□□ -0.19
PTPN13-204ENST00000436978 ZNF154Q13106 437 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 ADAM11O75078 769 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 CLRN3Q8NCR9 226 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 OR4D11Q8NGI4 311 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 OR2T8A6NH00 312 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 OR1L6Q8NGR2 347 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 GATCO43716 136 aaKnown RBP13.88□□□□□ -0.19
PTPN13-204ENST00000436978 OR1L8Q8NGR8 309 aa13.88□□□□□ -0.19
PTPN13-204ENST00000436978 C1QAP02745 245 aa13.87□□□□□ -0.19
PTPN13-204ENST00000436978 SMAGPQ0VAQ4 97 aa13.87□□□□□ -0.19
PTPN13-204ENST00000436978 GAPTQ8N292 157 aa13.87□□□□□ -0.19
PTPN13-204ENST00000436978 C10orf113Q5VZT2 155 aa13.87□□□□□ -0.19
PTPN13-204ENST00000436978 FDX2Q6P4F2 183 aa13.87□□□□□ -0.19
PTPN13-204ENST00000436978 RNASEKQ6P5S7 137 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms