RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 DOCK11Q5JSL3 2073 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 FUOMA2VDF0 154 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 CENPXA8MT69 81 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 LYRM1O43325 122 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 NDUFB3O43676 98 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 CD74P04233 296 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 CD3DP04234 171 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 TBPP20226 339 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 FAUP35544 74 aaKnown RBP19.13■□□□□ 0.65
CPSF4-204ENST00000436336 EDDM3AQ14507 147 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 NCOR1P1Q9H4R4 102 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 MIOXQ9UGB7 285 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 KIF25Q9UIL4 384 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 ANXA10Q9UJ72 324 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 TRAPPC2LQ9UL33 140 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 MGAT4AQ9UM21 535 aa19.13■□□□□ 0.65
CPSF4-204ENST00000436336 KIAA2026Q5HYC2 2103 aa19.12■□□□□ 0.65
CPSF4-204ENST00000436336 GLIPR1P48060 266 aa19.12■□□□□ 0.65
CPSF4-204ENST00000436336 ACTBL2Q562R1 376 aa19.12■□□□□ 0.65
CPSF4-204ENST00000436336 LRRC10Q5BKY1 277 aa19.12■□□□□ 0.65
CPSF4-204ENST00000436336 PERPQ96FX8 193 aa19.12■□□□□ 0.65
CPSF4-204ENST00000436336 C11orf54Q9H0W9 315 aaPredicted RBP19.12■□□□□ 0.65
CPSF4-204ENST00000436336 HRASLSQ9HDD0 168 aa19.12■□□□□ 0.65
CPSF4-204ENST00000436336 MBNL3Q9NUK0 354 aaKnown RBP19.12■□□□□ 0.65
CPSF4-204ENST00000436336 FBN2P35556 2912 aa19.12■□□□□ 0.65
CPSF4-204ENST00000436336 CELSR2Q9HCU4 2923 aa19.12■□□□□ 0.65
CPSF4-204ENST00000436336 IGKV1D-8A0A087WSZ0 117 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 MEIKINA0A087WXM9 373 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 KIR2DS1A0A191URI9 304 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 KIR2DS4P43632 304 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 P2RX3P56373 397 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 TAS2R46P59540 309 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 KIR2DS1Q14954 304 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 RGS21Q2M5E4 152 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 OR5AP2Q8NGF4 316 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 CCDC107Q8WV48 283 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 ARID1AO14497 2285 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 NAP1L6A6NFF2 107 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 NDUFS8O00217 210 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 DVL1O14640 695 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 RAB3DO95716 219 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 RPS2P15880 293 aaKnown RBP19.11■□□□□ 0.65
CPSF4-204ENST00000436336 RCC1P18754 421 aaPredicted RBP19.11■□□□□ 0.65
CPSF4-204ENST00000436336 DNASE1P24855 282 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 EDDM3BP56851 147 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 CHRFAM7AQ494W8 412 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 MZT2BQ6NZ67 158 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 TPRX1Q8N7U7 411 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 OR4C16Q8NGL9 310 aa19.11■□□□□ 0.65
CPSF4-204ENST00000436336 BEX4Q9NWD9 120 aaPredicted RBP19.11■□□□□ 0.65
CPSF4-204ENST00000436336 ODAMA1E959 279 aa19.1■□□□□ 0.65
CPSF4-204ENST00000436336 NDUFB7P17568 137 aa19.1■□□□□ 0.65
CPSF4-204ENST00000436336 HRH1P35367 487 aa19.1■□□□□ 0.65
CPSF4-204ENST00000436336 MEF2DQ14814 521 aa19.1■□□□□ 0.65
CPSF4-204ENST00000436336 RNASE10Q5GAN6 216 aaKnown RBP19.1■□□□□ 0.65
CPSF4-204ENST00000436336 NLRC3Q7RTR2 1065 aa19.1■□□□□ 0.65
CPSF4-204ENST00000436336 FAM168AQ92567 244 aa19.1■□□□□ 0.65
CPSF4-204ENST00000436336 NEIL1Q96FI4 390 aaPredicted RBP19.1■□□□□ 0.65
CPSF4-204ENST00000436336 PCDHB10Q9UN67 800 aa19.1■□□□□ 0.65
CPSF4-204ENST00000436336 PTPN13Q12923 2485 aa19.1■□□□□ 0.65
CPSF4-204ENST00000436336 SPG11Q96JI7 2443 aa19.09■□□□□ 0.65
CPSF4-204ENST00000436336 TRDCB7Z8K6 153 aa19.09■□□□□ 0.65
CPSF4-204ENST00000436336 FCN3O75636 299 aa19.09■□□□□ 0.65
CPSF4-204ENST00000436336 ARPC4P59998 168 aa19.09■□□□□ 0.65
CPSF4-204ENST00000436336 CLEC2AQ6UVW9 174 aa19.09■□□□□ 0.65
CPSF4-204ENST00000436336 OR8B3Q8NGG8 313 aa19.09■□□□□ 0.65
CPSF4-204ENST00000436336 OR4D10Q8NGI6 311 aa19.09■□□□□ 0.65
CPSF4-204ENST00000436336 OR5H2Q8NGV7 314 aa19.09■□□□□ 0.65
CPSF4-204ENST00000436336 OR8B2Q96RD0 313 aa19.09■□□□□ 0.65
CPSF4-204ENST00000436336 PATZ1Q9HBE1 687 aaKnown RBP19.09■□□□□ 0.65
CPSF4-204ENST00000436336 FASNP49327 2511 aaKnown RBP19.09■□□□□ 0.65
CPSF4-204ENST00000436336 M0QYG6 137 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 PTTG1O95997 202 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 PMP2P02689 132 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 WNT2P09544 360 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 OR3A3P47888 321 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 HLA-DRB3P79483 266 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 VAX1Q5SQQ9 334 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 C6orf183Q5T699 404 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 FAAP20Q6NZ36 180 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 TRAT1Q6PIZ9 186 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 FGFRL1Q8N441 504 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 PIMREGQ9BSJ6 248 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 BPESC1Q9GZL8 116 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 TINAGL1Q9GZM7 467 aaPredicted RBP19.08■□□□□ 0.65
CPSF4-204ENST00000436336 KCNIP1Q9NZI2 227 aa19.08■□□□□ 0.65
CPSF4-204ENST00000436336 TACC2O95359 2948 aa19.08■□□□□ 0.64
CPSF4-204ENST00000436336 TRAV39A0A0B4J263 110 aa19.08■□□□□ 0.64
CPSF4-204ENST00000436336 GSTT2P0CG29 244 aa19.08■□□□□ 0.64
CPSF4-204ENST00000436336 DSCR9P59020 149 aa19.08■□□□□ 0.64
CPSF4-204ENST00000436336 CDK10Q15131 360 aa19.08■□□□□ 0.64
CPSF4-204ENST00000436336 ZNF841Q6ZN19 808 aa19.08■□□□□ 0.64
CPSF4-204ENST00000436336 ZNF554Q86TJ5 538 aa19.08■□□□□ 0.64
CPSF4-204ENST00000436336 C10orf105Q8TEF2 133 aa19.08■□□□□ 0.64
CPSF4-204ENST00000436336 LURAP1Q96LR2 239 aa19.08■□□□□ 0.64
CPSF4-204ENST00000436336 MCUBQ9NWR8 336 aa19.08■□□□□ 0.64
CPSF4-204ENST00000436336 OR6C3Q9NZP0 311 aa19.08■□□□□ 0.64
CPSF4-204ENST00000436336 GPR37O15354 613 aa19.07■□□□□ 0.64
CPSF4-204ENST00000436336 FABP7O15540 132 aa19.07■□□□□ 0.64
CPSF4-204ENST00000436336 HMGN3Q15651 99 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms