RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 TUBG2Q9NRH3 451 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 LPAR3Q9UBY5 353 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 GPR137BO60478 399 aa14.21□□□□□ -0.13
LIMK1-203ENST00000435201 PGA5P0DJD9 388 aa14.21□□□□□ -0.13
LIMK1-203ENST00000435201 S100GP29377 79 aa14.21□□□□□ -0.13
LIMK1-203ENST00000435201 P2RY1P47900 373 aa14.21□□□□□ -0.13
LIMK1-203ENST00000435201 TMEM33P57088 247 aa14.21□□□□□ -0.13
LIMK1-203ENST00000435201 ERVS71-1P61550 626 aa14.21□□□□□ -0.13
LIMK1-203ENST00000435201 C20orf204Q6ZNR8 217 aa14.21□□□□□ -0.13
LIMK1-203ENST00000435201 ZNF695Q8IW36 515 aa14.21□□□□□ -0.13
LIMK1-203ENST00000435201 OR4D5Q8NGN0 318 aa14.21□□□□□ -0.13
LIMK1-203ENST00000435201 KIRREL1Q96J84 757 aa14.21□□□□□ -0.13
LIMK1-203ENST00000435201 POMT1Q9Y6A1 747 aa14.21□□□□□ -0.13
LIMK1-203ENST00000435201 IGKV1D-13A0A0B4J2D9 117 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 NPIPB11E5RHQ5 1161 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 WISP2O76076 250 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 IGKV1-13P0DP09 117 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 SPINK2P20155 84 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 PSG7Q13046 419 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 ZNF169Q14929 603 aaPredicted RBP14.21□□□□□ -0.14
LIMK1-203ENST00000435201 OR8G1Q15617 311 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 PCSK4Q6UW60 755 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 WDR31Q8NA23 367 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 OR52M1Q8NGK5 317 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 OR10J5Q8NHC4 309 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 NRIP2Q9BQI9 281 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 PLSCR4Q9NRQ2 329 aa14.21□□□□□ -0.14
LIMK1-203ENST00000435201 CACNA1GO43497 2377 aa14.2□□□□□ -0.14
LIMK1-203ENST00000435201 PIGBOS1A0A0B4J2F0 54 aa14.2□□□□□ -0.14
LIMK1-203ENST00000435201 ZNF705EA8MWA4 302 aaPredicted RBP14.2□□□□□ -0.14
LIMK1-203ENST00000435201 ACAA1P09110 424 aaPredicted RBP14.2□□□□□ -0.14
LIMK1-203ENST00000435201 EIF2S3P41091 472 aaKnown RBP14.2□□□□□ -0.14
LIMK1-203ENST00000435201 TCF15Q12870 199 aa14.2□□□□□ -0.14
LIMK1-203ENST00000435201 ZNF154Q13106 437 aa14.2□□□□□ -0.14
LIMK1-203ENST00000435201 FIP1L1Q6UN15 594 aaKnown RBP14.2□□□□□ -0.14
LIMK1-203ENST00000435201 IL34Q6ZMJ4 242 aa14.2□□□□□ -0.14
LIMK1-203ENST00000435201 C5orf24Q7Z6I8 188 aa14.2□□□□□ -0.14
LIMK1-203ENST00000435201 H1FOOQ8IZA3 346 aaPredicted RBP14.2□□□□□ -0.14
LIMK1-203ENST00000435201 UBAC2Q8NBM4 344 aa14.2□□□□□ -0.14
LIMK1-203ENST00000435201 BPIFCQ8NFQ6 507 aa14.2□□□□□ -0.14
LIMK1-203ENST00000435201 KLF14Q8TD94 323 aaPredicted RBP14.2□□□□□ -0.14
LIMK1-203ENST00000435201 OBP2BQ9NPH6 170 aa14.2□□□□□ -0.14
LIMK1-203ENST00000435201 MMP26Q9NRE1 261 aa14.2□□□□□ -0.14
LIMK1-203ENST00000435201 OR2W1Q9Y3N9 320 aa14.2□□□□□ -0.14
LIMK1-203ENST00000435201 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.19□□□□□ -0.14
LIMK1-203ENST00000435201 SLC33A1O00400 549 aaPredicted RBP14.19□□□□□ -0.14
LIMK1-203ENST00000435201 HSD17B6O14756 317 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 NXPH2O95156 264 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 OR2H2O95918 312 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 CEACAM1P13688 526 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 UCP1P25874 307 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 GNMTQ14749 295 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 ZNF146Q15072 292 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 ZNF324BQ6AW86 544 aaPredicted RBP14.19□□□□□ -0.14
LIMK1-203ENST00000435201 IGFL3Q6UXB1 125 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 SELENOHQ8IZQ5 122 aaKnown RBP14.19□□□□□ -0.14
LIMK1-203ENST00000435201 IL22RA2Q969J5 263 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 ABHD14BQ96IU4 210 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 SMIM8Q96KF7 97 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 USB1Q9BQ65 265 aaKnown RBP14.19□□□□□ -0.14
LIMK1-203ENST00000435201 CCL28Q9NRJ3 127 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 PROCRQ9UNN8 238 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 SPEF1Q9Y4P9 236 aa14.19□□□□□ -0.14
LIMK1-203ENST00000435201 EP300Q09472 2414 aaPredicted RBP14.19□□□□□ -0.14
LIMK1-203ENST00000435201 H0Y980 276 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 CDIPTO14735 213 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 APOC3P02656 99 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 RCC1P18754 421 aaPredicted RBP14.18□□□□□ -0.14
LIMK1-203ENST00000435201 RTP5Q14D33 572 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 ALKBH6Q3KRA9 238 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 ZNF497Q6ZNH5 498 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 OR5D13Q8NGL4 314 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 TAAR6Q96RI8 345 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 RCL1Q9Y2P8 373 aaKnown RBP14.18□□□□□ -0.14
LIMK1-203ENST00000435201 BORCS7-ASMTA0A0B4J1R7 106 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 NKX2-6A6NCS4 301 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 SIRPB1O00241 398 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 SH2D1BO14796 132 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 WDR1O75083 606 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 AGFG2O95081 481 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 MPV17P39210 176 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 SULT1A2P50226 295 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 FOXF2Q12947 444 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 P2RY6Q15077 328 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 IGFBP7Q16270 282 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.18□□□□□ -0.14
LIMK1-203ENST00000435201 OR8G5Q8NG78 346 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 NARS2Q96I59 477 aaKnown RBP14.18□□□□□ -0.14
LIMK1-203ENST00000435201 BCL2L14Q9BZR8 327 aa14.18□□□□□ -0.14
LIMK1-203ENST00000435201 PURGQ9UJV8 347 aaKnown RBP14.18□□□□□ -0.14
LIMK1-203ENST00000435201 CLEC18AA5D8T8 446 aa14.17□□□□□ -0.14
LIMK1-203ENST00000435201 TNFSF13O75888 250 aa14.17□□□□□ -0.14
LIMK1-203ENST00000435201 WNT2P09544 360 aa14.17□□□□□ -0.14
LIMK1-203ENST00000435201 PVALBP20472 110 aaPredicted RBP14.17□□□□□ -0.14
LIMK1-203ENST00000435201 NOVA1P51513 510 aaKnown RBP14.17□□□□□ -0.14
LIMK1-203ENST00000435201 BLOC1S1P78537 153 aa14.17□□□□□ -0.14
LIMK1-203ENST00000435201 MST1LQ2TV78 715 aa14.17□□□□□ -0.14
LIMK1-203ENST00000435201 C1orf174Q8IYL3 243 aa14.17□□□□□ -0.14
LIMK1-203ENST00000435201 BOLLQ8N9W6 283 aaKnown RBP14.17□□□□□ -0.14
LIMK1-203ENST00000435201 CLEC18CQ8NCF0 446 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms