RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 ZNF79Q15937 498 aa19.22■□□□□ 0.67
SMARCAL1-208ENST00000434435 C11orf91Q3C1V1 193 aa19.22■□□□□ 0.67
SMARCAL1-208ENST00000434435 TRAPPC6BQ86SZ2 158 aa19.22■□□□□ 0.67
SMARCAL1-208ENST00000434435 WFDC11Q8NEX6 87 aa19.22■□□□□ 0.67
SMARCAL1-208ENST00000434435 OR4K15Q8NH41 348 aa19.22■□□□□ 0.67
SMARCAL1-208ENST00000434435 MRPL30Q8TCC3 161 aaKnown RBP19.22■□□□□ 0.67
SMARCAL1-208ENST00000434435 WDR12Q9GZL7 423 aaKnown RBP19.22■□□□□ 0.67
SMARCAL1-208ENST00000434435 NCOR1P1Q9H4R4 102 aa19.22■□□□□ 0.67
SMARCAL1-208ENST00000434435 TRAPPC2LQ9UL33 140 aa19.22■□□□□ 0.67
SMARCAL1-208ENST00000434435 TRBV6-6A0A0A6YYG2 114 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 SSX5O60225 188 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 FOXH1O75593 365 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 ECDO95905 644 aaPredicted RBP19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 LPLP06858 475 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 FCGR3AP08637 254 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 DTYMKP23919 212 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 CBX5P45973 191 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 RPL31P62899 125 aaKnown RBP19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 RNASE12Q5GAN4 147 aaKnown RBP19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 CD276Q5ZPR3 534 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 BTN2A1Q7KYR7 527 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 MOB1BQ7L9L4 216 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 SETD6Q8TBK2 473 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 TSC22D3Q99576 134 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 DCTN5Q9BTE1 182 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 OR6C3Q9NZP0 311 aa19.21■□□□□ 0.67
SMARCAL1-208ENST00000434435 MEIOCA2RUB1 952 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 POM121CA8CG34 1229 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 GABARAPH6UMI1 98 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 GLP1RP43220 463 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 MEF2CQ06413 473 aaPredicted RBP19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 ZNF846Q147U1 533 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 FAM185AQ8N0U4 392 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 GPX8Q8TED1 209 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 CCDC107Q8WV48 283 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 SMIM4Q8WVI0 70 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 FCAMRQ8WWV6 532 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 SRRQ9GZT4 340 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 IFT46Q9NQC8 304 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 C19orf12Q9NSK7 152 aa19.2■□□□□ 0.66
SMARCAL1-208ENST00000434435 TRGV10A0A0A0MS01 117 aa19.19■□□□□ 0.66
SMARCAL1-208ENST00000434435 hADV38S2A0JD32 116 aa19.19■□□□□ 0.66
SMARCAL1-208ENST00000434435 KIAA1324LA8MWY0 1029 aaPredicted RBP19.19■□□□□ 0.66
SMARCAL1-208ENST00000434435 FAM157AC9JC47 383 aa19.19■□□□□ 0.66
SMARCAL1-208ENST00000434435 DGCR2P98153 550 aa19.19■□□□□ 0.66
SMARCAL1-208ENST00000434435 OR52I2Q8NH67 350 aa19.19■□□□□ 0.66
SMARCAL1-208ENST00000434435 C8orf46Q8TAG6 207 aa19.19■□□□□ 0.66
SMARCAL1-208ENST00000434435 RPUSD1Q9UJJ7 312 aaKnown RBP19.19■□□□□ 0.66
SMARCAL1-208ENST00000434435 MGAT4AQ9UM21 535 aa19.19■□□□□ 0.66
SMARCAL1-208ENST00000434435 LOC105371242A0A075B767 164 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 A0A1W2PQ09 198 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 MEIS3P1A6NDR6 274 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 GSTZ1O43708 216 aaPredicted RBP19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 INHBBP09529 407 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 LCN2P80188 198 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 C6orf183Q5T699 404 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 ZNF880Q6PDB4 577 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 TRAT1Q6PIZ9 186 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 GDPD1Q8N9F7 314 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 OCSTAMPQ9BR26 566 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 Q9N2K0 584 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 MBNL3Q9NUK0 354 aaKnown RBP19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 LINC00312Q9Y6C7 94 aa19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 MAP1AP78559 2803 aaPredicted RBP19.18■□□□□ 0.66
SMARCAL1-208ENST00000434435 ITPR3Q14573 2671 aa19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 C22orf46C9J442 243 aa19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 Q6ZPA2 131 aa19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 Q8N402 240 aa19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 ZNF565Q8N9K5 539 aa19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 OR13A1Q8NGR1 328 aa19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 MRGPRDQ8TDS7 321 aa19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 CORO2AQ92828 525 aa19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 KCNIP1Q9NZI2 227 aa19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 ZNF230Q9UIE0 474 aaPredicted RBP19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 UBE2J1Q9Y385 318 aaPredicted RBP19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 MED13LQ71F56 2210 aa19.17■□□□□ 0.66
SMARCAL1-208ENST00000434435 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.17■□□□□ 0.661e-5■■■■□ 21.5
SMARCAL1-208ENST00000434435 TRAV39A0A0B4J263 110 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 ENSAO43768 121 aaKnown RBP19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 RCC1P18754 421 aaPredicted RBP19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 ZFP36P26651 326 aaKnown RBP19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 RCVRNP35243 200 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 ACTBP60709 375 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 ACTG1P63261 375 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 HLA-DRB3P79483 266 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 ZNF273Q14593 569 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 SRSF7Q16629 238 aaKnown RBP eCLIP19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 TCF23Q7RTU1 214 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 ST6GALNAC5Q9BVH7 336 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 ZNF286AQ9HBT8 521 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 MTFP1Q9UDX5 166 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 ANAPC10Q9UM13 185 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 POLR3KQ9Y2Y1 108 aaPredicted RBP19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 NOTCH2Q04721 2471 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 MYO9AB2RTY4 2548 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 VPS13CQ709C8 3753 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 WNK2Q9Y3S1 2297 aa19.16■□□□□ 0.66
SMARCAL1-208ENST00000434435 PPIAL4CA0A0B4J2A2 164 aa19.15■□□□□ 0.66
SMARCAL1-208ENST00000434435 A0A1W2PPH5 198 aa19.15■□□□□ 0.66
SMARCAL1-208ENST00000434435 MEX3AA1L020 520 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms