RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 CMSS1Q9BQ75 279 aaKnown RBP12.66□□□□□ -0.38
CNOT9-205ENST00000433439 HDHD3Q9BSH5 251 aaPredicted RBP12.66□□□□□ -0.38
CNOT9-205ENST00000433439 ADAM30Q9UKF2 790 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 ELF5Q9UKW6 265 aaPredicted RBP12.66□□□□□ -0.38
CNOT9-205ENST00000433439 TRAPPC2LQ9UL33 140 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 HSF4Q9ULV5 492 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 INSIG2Q9Y5U4 225 aa12.66□□□□□ -0.38
CNOT9-205ENST00000433439 A0A0G2JMP0 313 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 A0A0X1KG70 313 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 KIR2DS1A0A191URI9 304 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 TMEM235A6NFC5 223 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 CD5LO43866 347 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 LY6G6DO95868 133 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 MT-ND4P03905 459 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 PTHLHP12272 177 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 PAX2Q02962 417 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 KRTAP1-1Q07627 177 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 TMEM69Q5SWH9 247 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 CLEC9AQ6UXN8 241 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 ZNF497Q6ZNH5 498 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 Q71RC1 249 aaPredicted RBP12.65□□□□□ -0.38
CNOT9-205ENST00000433439 OR4M2Q8NGB6 313 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 OR13A1Q8NGR1 328 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 MIXL1Q9H2W2 232 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 C7orf69Q9H7B7 122 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 EXTL2Q9UBQ6 330 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 LPAR3Q9UBY5 353 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 KCNS2Q9ULS6 477 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 KCNK7Q9Y2U2 307 aa12.65□□□□□ -0.38
CNOT9-205ENST00000433439 POLR3KQ9Y2Y1 108 aaPredicted RBP12.65□□□□□ -0.38
CNOT9-205ENST00000433439 A0A1W2PPH5 198 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 MFNGO00587 321 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 FOSL1P15407 271 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 MNDAP41218 407 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 GNG2P59768 71 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 MEF2CQ06413 473 aaPredicted RBP12.64□□□□□ -0.39
CNOT9-205ENST00000433439 CNPY1Q3B7I2 92 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 C11orf91Q3C1V1 193 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 TCF23Q7RTU1 214 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 LY6G5BQ8NDX9 201 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 C8orf46Q8TAG6 207 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 UBALD1Q8TB05 177 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 MRPL30Q8TCC3 161 aaKnown RBP12.64□□□□□ -0.39
CNOT9-205ENST00000433439 DIRAS2Q96HU8 199 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 CMTM3Q96MX0 182 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 PCGF1Q9BSM1 259 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 GSX1Q9H4S2 264 aaPredicted RBP12.64□□□□□ -0.39
CNOT9-205ENST00000433439 OR6C3Q9NZP0 311 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 LINC00312Q9Y6C7 94 aa12.64□□□□□ -0.39
CNOT9-205ENST00000433439 ABCA1O95477 2261 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 A0A0A6YYH2 397 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 A6NJ64 397 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 XRCC3O43542 346 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 CA11O75493 328 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 ZNF728P0DKX0 622 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 S100A5P33763 92 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 TALDO1P37837 337 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 DLX1P56177 255 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 TAS2R20P59543 309 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 ERVFRD-1P60508 538 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 PRB3Q04118 309 aaPredicted RBP12.63□□□□□ -0.39
CNOT9-205ENST00000433439 ARL6IP1Q15041 203 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 LTC4SQ16873 150 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 ZNF260Q3ZCT1 412 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 METTL11BQ5VVY1 283 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 CNIH2Q6PI25 160 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 SNX29P2Q8IUI4 249 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 PRR18Q8N4B5 295 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 ZNF565Q8N9K5 539 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 NUDCD2Q8WVJ2 157 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 GCDHQ92947 438 aaPredicted RBP12.63□□□□□ -0.39
CNOT9-205ENST00000433439 ZNF714Q96N38 554 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 NXF2Q9GZY0 626 aaKnown RBP12.63□□□□□ -0.39
CNOT9-205ENST00000433439 MMP27Q9H306 513 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 SIRT7Q9NRC8 400 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 AUP1Q9Y679 476 aa12.63□□□□□ -0.39
CNOT9-205ENST00000433439 KIAA2026Q5HYC2 2103 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 SERPINE3A8MV23 424 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 TOX4O94842 621 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 FCER2P06734 321 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 GSTP1P09211 210 aaKnown RBP12.62□□□□□ -0.39
CNOT9-205ENST00000433439 RCC1P18754 421 aaPredicted RBP12.62□□□□□ -0.39
CNOT9-205ENST00000433439 OMGP23515 440 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 RNASE12Q5GAN4 147 aaKnown RBP12.62□□□□□ -0.39
CNOT9-205ENST00000433439 RFESDQ8TAC1 157 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 MAFIPQ8WZ33 124 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 DACT3Q96B18 629 aaPredicted RBP12.62□□□□□ -0.39
CNOT9-205ENST00000433439 WDFY2Q96P53 400 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 AUNIPQ9H7T9 357 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 KCNIP1Q9NZI2 227 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 UBE2J1Q9Y385 318 aaPredicted RBP12.62□□□□□ -0.39
CNOT9-205ENST00000433439 WNK2Q9Y3S1 2297 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 CELSR1Q9NYQ6 3014 aa12.62□□□□□ -0.39
CNOT9-205ENST00000433439 MAP1AP78559 2803 aaPredicted RBP12.61□□□□□ -0.39
CNOT9-205ENST00000433439 FBN3Q75N90 2809 aa12.61□□□□□ -0.39
CNOT9-205ENST00000433439 ZNF729A6NN14 1252 aaPredicted RBP12.61□□□□□ -0.39
CNOT9-205ENST00000433439 A8MV72 311 aaPredicted RBP12.61□□□□□ -0.39
CNOT9-205ENST00000433439 GATA3P23771 443 aa12.61□□□□□ -0.39
CNOT9-205ENST00000433439 TNFSF8P32971 234 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms