RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 YIPF6Q96EC8 236 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 CHRNA10Q9GZZ6 450 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 TMBIM4Q9HC24 238 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 DIABLOQ9NR28 239 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 HMGXB4Q9UGU5 601 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 BRCA1P38398 1863 aaKnown RBP3.56□□□□□ -1.84
USP54-206ENST00000433394 PSME4Q14997 1843 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 ARFGEF1Q9Y6D6 1849 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 LOC102724200A0A096LPH7 203 aaPredicted RBP3.55□□□□□ -1.84
USP54-206ENST00000433394 LRCOL1A6NCL2 159 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 PRAMEF26H0Y7S4 382 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 RGS5O15539 181 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 IGLV2-8P01709 118 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 P2RY2P41231 377 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 ATP5G2Q06055 141 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 C2orf80Q0P641 193 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 ITGB3BPQ13352 177 aaPredicted RBP3.55□□□□□ -1.84
USP54-206ENST00000433394 XRCC4Q13426 336 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 ACTL10Q5JWF8 245 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 FAM173BQ6P4H8 233 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 HMGN2P46Q86SG4 172 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 ZCCHC24Q8N2G6 241 aaKnown RBP3.55□□□□□ -1.84
USP54-206ENST00000433394 RNF182Q8N6D2 247 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 ZNF615Q8N8J6 731 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 NELFBQ8WX92 580 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 OPTNQ96CV9 577 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 C18orf15Q96N68 181 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 QKIQ96PU8 341 aaKnown RBP eCLIP3.55□□□□□ -1.84
USP54-206ENST00000433394 SHCBP1LQ9BZQ2 653 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 BOLA2Q9H3K6 86 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 RMND1Q9NWS8 449 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 IL37Q9NZH6 218 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 S4R3C0 116 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 LAMA4Q16363 1823 aa3.55□□□□□ -1.84
USP54-206ENST00000433394 CCL15-CCL14A0A0B4J2E2 113 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 GOLGA8QA0A0J9YX86 632 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 OR7C2O60412 319 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 HLA-DRAP01903 254 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 RPA3P35244 121 aaPredicted RBP3.54□□□□□ -1.84
USP54-206ENST00000433394 KCNJ3P48549 501 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 UBE2KP61086 200 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 ZNF616Q08AN1 781 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 STX3Q13277 289 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 CCL15Q16663 113 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 HBMQ6B0K9 141 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 MED27Q6P2C8 311 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 IGFL3Q6UXB1 125 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 CASP12Q6UXS9 341 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 ZNF101Q8IZC7 436 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 ZNF709Q8N972 641 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 SPANXA2-OT1Q8N9U9 137 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 IP6K3Q96PC2 410 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 HDHD2Q9H0R4 259 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 METTL8Q9H825 291 aaKnown RBP3.54□□□□□ -1.84
USP54-206ENST00000433394 PLEKHF2Q9H8W4 249 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 INSIG2Q9Y5U4 225 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 DOCK8Q8NF50 2099 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 MYH2Q9UKX2 1941 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 FER1L6Q2WGJ9 1857 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 SLX4Q8IY92 1834 aa3.54□□□□□ -1.84
USP54-206ENST00000433394 ARID1AO14497 2285 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 DICER1Q9UPY3 1922 aaKnown RBP3.53□□□□□ -1.84
USP54-206ENST00000433394 CEACAM18A8MTB9 384 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 UBDO15205 165 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 MYO1DO94832 1006 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 OR2A4O95047 310 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 LDOC1O95751 146 aaPredicted RBP3.53□□□□□ -1.84
USP54-206ENST00000433394 FADS2O95864 444 aaKnown RBP3.53□□□□□ -1.84
USP54-206ENST00000433394 CST4P01036 141 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 RLN2P04090 185 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 NELFEP18615 380 aaKnown RBP3.53□□□□□ -1.84
USP54-206ENST00000433394 RPS12P25398 132 aaKnown RBP3.53□□□□□ -1.84
USP54-206ENST00000433394 ADORA1P30542 326 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 HSPA13P48723 471 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 CCL23P55773 120 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 GUSBP1Q15486 140 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 RGS21Q2M5E4 152 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 TTMPQ5BVD1 217 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 FKBP1CQ5VVH2 108 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 SLC25A34Q6PIV7 304 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 DEFB132Q7Z7B7 95 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 CYP4Z2PQ8N1L4 340 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 OR52N1Q8NH53 320 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 DYDC1Q8WWB3 177 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 OR2A7Q96R45 310 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 APOL4Q9BPW4 351 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 C9orf16Q9BUW7 83 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 NDEL1Q9GZM8 345 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 ZNF780BQ9Y6R6 833 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 CACNA1SQ13698 1873 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 FOCADQ5VW36 1801 aa3.53□□□□□ -1.84
USP54-206ENST00000433394 MYO5AQ9Y4I1 1855 aaKnown RBP3.52□□□□□ -1.85
USP54-206ENST00000433394 ZNF532Q9HCE3 1301 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 A0A0D9SFI3 127 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 C1orf232A0A0U1RR37 186 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 COLCA2A8K830 154 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 H3BQV1 296 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 SLC37A4O43826 429 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 CDK14O94921 469 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms