RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ZNF806P0C7X5 589 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 SRSF5Q13243 272 aaKnown RBP3.28□□□□□ -1.88
SHPRH-205ENST00000433355 MICBQ29980 383 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 PERPQ96FX8 193 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 MRPL37Q9BZE1 423 aaKnown RBP3.28□□□□□ -1.88
SHPRH-205ENST00000433355 TOLLIPQ9H0E2 274 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 HIF1ANQ9NWT6 349 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 FAM231BA6NCW3 169 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 SEC14L6B5MCN3 397 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 AQP7O14520 342 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 RPL29P47914 159 aaKnown RBP3.28□□□□□ -1.88
SHPRH-205ENST00000433355 TPPP2P59282 170 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 HLXQ14774 488 aaPredicted RBP3.28□□□□□ -1.88
SHPRH-205ENST00000433355 SLC35G3Q8N808 338 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF610Q8N9Z0 462 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 TMED6Q8WW62 240 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 EXTL1Q92935 676 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 MESP1Q9BRJ9 268 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 IGHV5-51A0A0C4DH38 117 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 ZSCAN5BA6NJL1 495 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 INS-IGF2F8WCM5 200 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 J3KTA2 159 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 PPM1DO15297 605 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 OR4A8P0C604 315 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 CT45A10P0DMU9 189 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF385AQ96PM9 386 aaKnown RBP3.28□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF649Q9BS31 505 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 ACTL6BO94805 426 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 COX6A1P12074 109 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 AADACL3Q5VUY0 350 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 KLHDC1Q8N7A1 406 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 OR8B12Q8NGG6 310 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 METTL1Q9UBP6 276 aaKnown RBP3.28□□□□□ -1.88
SHPRH-205ENST00000433355 KCNS2Q9ULS6 477 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 LHFPL6Q9Y693 200 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 EPHA1P21709 976 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 HLA-DRB3P79483 266 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 PIGFQ07326 219 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 DEFB133Q30KQ1 61 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 CT83Q5H943 113 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 COLCA1Q6ZS62 124 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 FBXL14Q8N1E6 418 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 OR10D3Q8NH80 312 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 PLEKHA3Q9HB20 300 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 MRPL22Q9NWU5 206 aaKnown RBP3.28□□□□□ -1.88
SHPRH-205ENST00000433355 ZNF586Q9NXT0 402 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 PIPOXQ9P0Z9 390 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 TRANK1O15050 2925 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 C9orf170A2RU37 121 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 CRYM-AS1A6NIL9 109 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 PRRG2O14669 202 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 KLF3P57682 345 aaPredicted RBP3.28□□□□□ -1.88
SHPRH-205ENST00000433355 PPP1R1AQ13522 171 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 H2BFWTQ7Z2G1 175 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 SLC22A18ASQ8N1D0 253 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 THAP3Q8WTV1 239 aaPredicted RBP3.28□□□□□ -1.88
SHPRH-205ENST00000433355 COPS9Q8WXC6 57 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 SDHCQ99643 169 aaPredicted RBP3.28□□□□□ -1.88
SHPRH-205ENST00000433355 TREM1Q9NP99 234 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 KCNE5Q9UJ90 142 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 JPT1Q9UK76 154 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 GAB2Q9UQC2 676 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 FAM157BP0CG42 384 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 PIGPP57054 158 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 Q6ZPB1 254 aaPredicted RBP3.28□□□□□ -1.88
SHPRH-205ENST00000433355 OR4A16Q8NH70 328 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 OR51E1Q8TCB6 317 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 GPR35Q9HC97 309 aa3.28□□□□□ -1.88
SHPRH-205ENST00000433355 hCG_38984A0A1B0GV85 526 aa3.28□□□□□ -1.89
SHPRH-205ENST00000433355 DBX1A6NMT0 343 aa3.28□□□□□ -1.89
SHPRH-205ENST00000433355 GATCO43716 136 aaKnown RBP3.28□□□□□ -1.89
SHPRH-205ENST00000433355 PAX2Q02962 417 aa3.28□□□□□ -1.89
SHPRH-205ENST00000433355 ETFDHQ16134 617 aa3.28□□□□□ -1.89
SHPRH-205ENST00000433355 LRRC10Q5BKY1 277 aa3.28□□□□□ -1.89
SHPRH-205ENST00000433355 RPUSD3Q6P087 351 aaKnown RBP3.28□□□□□ -1.89
SHPRH-205ENST00000433355 DNAJC5GQ8N7S2 189 aa3.28□□□□□ -1.89
SHPRH-205ENST00000433355 TBX5Q99593 518 aa3.28□□□□□ -1.89
SHPRH-205ENST00000433355 IGHV5-10-1A0A0J9YXX1 117 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 USF1P22415 310 aaPredicted RBP3.27□□□□□ -1.89
SHPRH-205ENST00000433355 CYP2G1PQ6ZSU1 146 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 OR10G3Q8NGC4 313 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 OR1L4Q8NGR5 311 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 SLC25A40Q8TBP6 338 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 RAB24Q969Q5 203 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 LINC00854A0A1B0GVQ3 168 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 OPN1LWP04000 364 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 C21orf62-AS1Q17RA5 79 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 CASTOR1Q8WTX7 329 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 RSRP1Q9BUV0 290 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 SPANXDQ9BXN6 97 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 OR51I2Q9H344 312 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 CISD1Q9NZ45 108 aaKnown RBP3.27□□□□□ -1.89
SHPRH-205ENST00000433355 TRAV38-1A0A0B4J264 116 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF729A6NN14 1252 aaPredicted RBP3.27□□□□□ -1.89
SHPRH-205ENST00000433355 H0Y8X5 98 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 MPPED1O15442 326 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 SYNGR2O43760 224 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 TTRP02766 147 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 GATAD1Q8WUU5 269 aa3.27□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF2Q9BSG1 426 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms