RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 ZNF818PQ6ZRF7 136 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 CALHM1Q8IU99 346 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 OR51H1Q8NH63 302 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 LHX4Q969G2 390 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 SDSLQ96GA7 329 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 SEMA5BQ9P283 1151 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 VAX2Q9UIW0 290 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 TCFL5Q9UL49 500 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 CFAP54Q96N23 3096 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 CPAMD8Q8IZJ3 1885 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 LRRC3CA6NJW4 275 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 GALR2O43603 387 aaPredicted RBP9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 TLX3O43711 291 aaPredicted RBP9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 CA11O75493 328 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 LCATP04180 440 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 TNFRSF4P43489 277 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 MNX1P50219 401 aaPredicted RBP9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 SLC25A26Q70HW3 274 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 OSR2Q8N2R0 312 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 LMX1AQ8TE12 382 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 GABRG3Q99928 467 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 CTDSP1Q9GZU7 261 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 METTL7AQ9H8H3 244 aa9.97□□□□□ -0.81
HMGCS1-202ENST00000433297 NCOA6Q14686 2063 aaPredicted RBP9.96□□□□□ -0.81
HMGCS1-202ENST00000433297 SPTBN5Q9NRC6 3674 aaKnown RBP9.96□□□□□ -0.81
HMGCS1-202ENST00000433297 UNC13CQ8NB66 2214 aa9.96□□□□□ -0.81
HMGCS1-202ENST00000433297 PFN1P07737 140 aaKnown RBP9.96□□□□□ -0.81
HMGCS1-202ENST00000433297 OR3A1P47881 315 aa9.96□□□□□ -0.81
HMGCS1-202ENST00000433297 ZNF726P1Q15940 193 aa9.96□□□□□ -0.81
HMGCS1-202ENST00000433297 CCL28Q9NRJ3 127 aa9.96□□□□□ -0.81
HMGCS1-202ENST00000433297 SLC39A9Q9NUM3 307 aa9.96□□□□□ -0.81
HMGCS1-202ENST00000433297 NAT8Q9UHE5 227 aa9.96□□□□□ -0.81
HMGCS1-202ENST00000433297 SPTY2D1-AS1A0A0U1RR47 76 aa9.96□□□□□ -0.82
HMGCS1-202ENST00000433297 DLEU1O43261 78 aa9.96□□□□□ -0.82
HMGCS1-202ENST00000433297 PATE4P0C8F1 98 aa9.96□□□□□ -0.82
HMGCS1-202ENST00000433297 CHRNA7P36544 502 aa9.96□□□□□ -0.82
HMGCS1-202ENST00000433297 SRPXP78539 464 aa9.96□□□□□ -0.82
HMGCS1-202ENST00000433297 TBX15Q96SF7 602 aa9.96□□□□□ -0.82
HMGCS1-202ENST00000433297 LRRC61Q9BV99 259 aa9.96□□□□□ -0.82
HMGCS1-202ENST00000433297 C11orf1Q9H5F2 150 aa9.96□□□□□ -0.82
HMGCS1-202ENST00000433297 IGKV1-12A0A0C4DH73 117 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 MAP1LC3B2A6NCE7 125 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 IGKV1D-12P01611 117 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 RPLP1P05386 114 aaKnown RBP9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 FOSL2P15408 326 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 MSR1P21757 451 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 IL24Q13007 206 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 OR51G1Q8NGK1 321 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 OR10J5Q8NHC4 309 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 DTD1Q8TEA8 209 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 PIGCQ92535 297 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 MAP1LC3BQ9GZQ8 125 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 IL23AQ9NPF7 189 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 V9GYS6 101 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 WDFY3Q8IZQ1 3526 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 POU2F2P09086 479 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 SCTP09683 121 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 RAB4AP20338 218 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 VDAC1P21796 283 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 BAXQ07812 192 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 EXT1Q16394 746 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 TMEM256Q8N2U0 113 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 OR2V1Q8NHB1 315 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 MS4A10Q96PG2 267 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 OR51I2Q9H344 312 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 POLR3KQ9Y2Y1 108 aaPredicted RBP9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 ASXL3Q9C0F0 2248 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 NPIPB13A6NJU9 1138 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 NPIPB4C9JG80 1138 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 ZNHIT1O43257 154 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 IFNA1P01562 189 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 CEACAM1P13688 526 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 EDN3P14138 238 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 TCN2P20062 427 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 BMP5P22003 454 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 ID3Q02535 119 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 ZNF92Q03936 586 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 DEFB133Q30KQ1 61 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 PHYHD1Q5SRE7 291 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 WDR5BQ86VZ2 330 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 OR2T10Q8NGZ9 312 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 OR4F5Q8NH21 305 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 FAM131CQ96AQ9 280 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 SIGLEC12Q96PQ1 595 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 OR4F4Q96R69 305 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 OPN3Q9H1Y3 402 aaPredicted RBP9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 PPP1R14DQ9NXH3 145 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 OBP2AQ9NY56 170 aa9.95□□□□□ -0.82
HMGCS1-202ENST00000433297 IRF2P14316 349 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 ZNF16P17020 682 aaPredicted RBP9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 SPINK2P20155 84 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 PAX9P55771 341 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 RPL23P62829 140 aaKnown RBP9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 RSPO1Q2MKA7 263 aaPredicted RBP9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 Q6ZPA2 131 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 OR1K1Q8NGR3 316 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 ACY3Q96HD9 319 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 OXGR1Q96P68 337 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 NAGKQ9UJ70 344 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 CHD3Q12873 2000 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms