RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 PBOV1Q9GZY1 135 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 TP53TG5Q9Y2B4 290 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 MRPS28Q9Y2Q9 187 aaKnown RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 PTPRQQ9UMZ3 2332 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 LAMA5O15230 3695 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 KIR2DS5A0A0G2JLQ3 304 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 A0A0G2JNG1 304 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 OR5H15A6NDH6 313 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 OR5H1A6NKK0 313 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 ZNF587BE7ETH6 402 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 H0YIG0 161 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 KIR2DS3K7RE56 304 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 ADAM10O14672 748 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 TSPAN2O60636 221 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 YIF1AO95070 293 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 DAOP14920 347 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 PVRP15151 417 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 FOLR1P15328 257 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 GLRA1P23415 457 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 DDTP30046 118 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 OR3A2P47893 321 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 CSNK2A1P68400 391 aaPredicted RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 CD69Q07108 199 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 KIR2DS5Q14953 304 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 UBE2V2Q15819 145 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 VWC2Q2TAL6 325 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 TMEM176BQ3YBM2 270 aaPredicted RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 CRIP3Q6Q6R5 217 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 COX15Q7KZN9 410 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 TMEM156Q8N614 296 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 APCDD1LQ8NCL9 501 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 CSNK2A3Q8NEV1 391 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 MBD3L2Q8NHZ7 208 aaPredicted RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 FAM110DQ8TAY7 271 aaPredicted RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 BMFQ96LC9 184 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 DIRC2Q96SL1 478 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 SUCNR1Q9BXA5 334 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 OR11A1Q9GZK7 315 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 EIF5A2Q9GZV4 153 aaKnown RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 CHRNA10Q9GZZ6 450 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 NXF5Q9H1B4 397 aaKnown RBP6.98□□□□□ -1.29
VTI1A-202ENST00000432306 WFDC1Q9HC57 220 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 ONECUT1Q9UBC0 465 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 MMACHCQ9Y4U1 282 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 SPTA1P02549 2419 aa6.98□□□□□ -1.29
VTI1A-202ENST00000432306 KNL1Q8NG31 2342 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 NUMA1Q14980 2115 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 LOC101059948A0A1B0GTJ6 334 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 C22orf46C9J442 243 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 C11orf98E9PRG8 122 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 TSTD3H0UI37 97 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 ETV2O00321 342 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-202ENST00000432306 HSD17B6O14756 317 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 PPP1R2P9O14990 202 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 NME2P1O60361 137 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 MBPP02686 304 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-202ENST00000432306 SRP19P09132 144 aaKnown RBP6.97□□□□□ -1.29
VTI1A-202ENST00000432306 GP1BBP13224 206 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 PLA2G2AP14555 144 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 ZNF17P17021 662 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 IGFBP2P18065 325 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 RPS10P46783 165 aaKnown RBP6.97□□□□□ -1.29
VTI1A-202ENST00000432306 GLIPR1P48060 266 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 GABRA4P48169 554 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 RAB9AP51151 201 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 RAB11AP62491 216 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 TMEM187Q14656 261 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 NNATQ16517 81 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 ACSF3Q4G176 576 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-202ENST00000432306 C14orf28Q4W4Y0 310 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 COA6Q5JTJ3 125 aaKnown RBP6.97□□□□□ -1.29
VTI1A-202ENST00000432306 ZNF506Q5JVG8 444 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 SPSB3Q6PJ21 355 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 DPPA3Q6W0C5 159 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 GATSQ8NAP1 163 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 SUMF2Q8NBJ7 301 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 CCDC54Q8NEL0 328 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 NUDT10Q8NFP7 164 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 OR13C9Q8NGT0 318 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 OR10G6Q8NH81 332 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 MFSD8Q8NHS3 518 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 CCL4L1Q8NHW4 92 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 SLAMF6Q96DU3 332 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 ARHGAP5-AS1Q96IT6 56 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 GABRG3Q99928 467 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 KLHDC3Q9BQ90 382 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 ANGPTL4Q9BY76 406 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 MAGT1Q9H0U3 335 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 OR10A2Q9H208 303 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 FAM60AQ9NP50 221 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 HRASLS2Q9NWW9 162 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 EHFQ9NZC4 300 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 GSKIPQ9P0R6 139 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 KCNIP3Q9Y2W7 256 aa6.97□□□□□ -1.29
VTI1A-202ENST00000432306 TRBV24-1A0A075B6N3 115 aa6.96□□□□□ -1.29
VTI1A-202ENST00000432306 IGKV3D-11A0A0A0MRZ8 115 aa6.96□□□□□ -1.29
VTI1A-202ENST00000432306 TMED7-TICAM2A0A0A6YYA0 188 aa6.96□□□□□ -1.29
VTI1A-202ENST00000432306 TRAV1-1A0A0B4J248 108 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms